RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MPHOSPH10O00566 681 aaKnown RBP19.89■□□□□ 0.77
SMC6-206ENST00000446852 SHROOM1Q2M3G4 852 aaPredicted RBP19.89■□□□□ 0.77
SMC6-206ENST00000446852 ASPRV1Q53RT3 343 aa19.89■□□□□ 0.77
SMC6-206ENST00000446852 NT5DC1Q5TFE4 455 aa19.89■□□□□ 0.77
SMC6-206ENST00000446852 TTLL6Q8N841 843 aa19.89■□□□□ 0.77
SMC6-206ENST00000446852 DHX36Q9H2U1 1008 aaKnown RBP19.89■□□□□ 0.77
SMC6-206ENST00000446852 SEC63Q9UGP8 760 aaKnown RBP19.89■□□□□ 0.77
SMC6-206ENST00000446852 INF2Q27J81 1249 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 CCDC186Q7Z3E2 898 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 MAN1B1Q9UKM7 699 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 TPM3P06753 285 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 KCNA3P22001 575 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
SMC6-206ENST00000446852 HSD3B7Q9H2F3 369 aa19.88■□□□□ 0.77
SMC6-206ENST00000446852 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SMC6-206ENST00000446852 KANK3Q6NY19 840 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 CCDC12Q8WUD4 166 aaPredicted RBP19.87■□□□□ 0.77
SMC6-206ENST00000446852 TDRD3Q9H7E2 651 aaKnown RBP19.87■□□□□ 0.77
SMC6-206ENST00000446852 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 ARFGEF1Q9Y6D6 1849 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 SMCO2A6NFE2 343 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 IKBKBO14920 756 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 NPM3O75607 178 aaKnown RBP19.87■□□□□ 0.77
SMC6-206ENST00000446852 ZNF543Q08ER8 600 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 PI4KBQ9UBF8 816 aa19.87■□□□□ 0.77
SMC6-206ENST00000446852 SLFN14P0C7P3 912 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 CFAP100Q494V2 611 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 CCDC93Q567U6 631 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 ARL6IP4Q66PJ3 421 aaKnown RBP19.86■□□□□ 0.77
SMC6-206ENST00000446852 ZSCAN29Q8IWY8 852 aaPredicted RBP19.86■□□□□ 0.77
SMC6-206ENST00000446852 SPATA20Q8TB22 786 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 CCDC17Q96LX7 622 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 DPEP1P16444 411 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 ATP2B2Q01814 1243 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 SH3RF1Q7Z6J0 888 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 C17orf53Q8N3J3 647 aaPredicted RBP19.86■□□□□ 0.77
SMC6-206ENST00000446852 SMARCE1Q969G3 411 aa19.86■□□□□ 0.77
SMC6-206ENST00000446852 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
SMC6-206ENST00000446852 SMTNL1A8MU46 457 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 OFD1O75665 1012 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 TMEM60Q9H2L4 133 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 C6orf50Q9HD87 102 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 PYCARDQ9ULZ3 195 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 MORC3Q14149 939 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 E2F4Q16254 413 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 TTBK2Q6IQ55 1244 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 PAGE5Q96GU1 130 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 PSMD1Q99460 953 aa19.85■□□□□ 0.77
SMC6-206ENST00000446852 LMOD1P29536 600 aaPredicted RBP19.84■□□□□ 0.77
SMC6-206ENST00000446852 GNA11P29992 359 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 AFMP43652 599 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 MYL5Q02045 173 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 RTKN2Q8IZC4 609 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 JMJD4Q9H9V9 463 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 ESYT2A0FGR8 921 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 CASP1P29466 404 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 LRMPQ12912 555 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 CERKLQ49MI3 558 aaPredicted RBP19.84■□□□□ 0.77
SMC6-206ENST00000446852 SOGA3Q5TF21 947 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 TATDN1Q6P1N9 297 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 KRT25Q7Z3Z0 450 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 COA7Q96BR5 231 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 ZNF277Q9NRM2 450 aaPredicted RBP19.84■□□□□ 0.77
SMC6-206ENST00000446852 ATRNL1Q5VV63 1379 aa19.84■□□□□ 0.77
SMC6-206ENST00000446852 GRIPAP1Q4V328 841 aa19.83■□□□□ 0.77
SMC6-206ENST00000446852 ADGRF4Q8IZF3 695 aa19.83■□□□□ 0.77
SMC6-206ENST00000446852 hCG_1984214I3L0E3 225 aa19.83■□□□□ 0.76
SMC6-206ENST00000446852 RAD17O75943 681 aa19.83■□□□□ 0.76
SMC6-206ENST00000446852 ATP1A3P13637 1013 aa19.83■□□□□ 0.76
SMC6-206ENST00000446852 CDC25AP30304 524 aa19.83■□□□□ 0.76
SMC6-206ENST00000446852 LONP1P36776 959 aaKnown RBP19.83■□□□□ 0.76
SMC6-206ENST00000446852 KCTD1Q719H9 257 aa19.83■□□□□ 0.76
SMC6-206ENST00000446852 ZNF713Q8N859 430 aaPredicted RBP19.83■□□□□ 0.76
SMC6-206ENST00000446852 PPP1R11O60927 126 aaPredicted RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 EEF2P13639 858 aaKnown RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 TPM4P67936 248 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 NONOQ15233 471 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMC6-206ENST00000446852 CCDC96Q2M329 555 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 RSBN1LQ6PCB5 846 aaPredicted RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 REXO1Q8N1G1 1221 aaKnown RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 TRIML1Q8N9V2 468 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 KIAA1524Q8TCG1 905 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 XPO4Q9C0E2 1151 aaKnown RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 IFNKQ9P0W0 207 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 BIN2Q9UBW5 565 aaPredicted RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 PSMD14O00487 310 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 SLC16A2P36021 539 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 GPATCH4Q5T3I0 446 aaKnown RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 PDXDC2PQ6P474 469 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 LARGE2Q8N3Y3 721 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 SLC16A10Q8TF71 515 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 TMEM260Q9NX78 707 aa19.82■□□□□ 0.76
SMC6-206ENST00000446852 COL2A1P02458 1487 aaPredicted RBP19.82■□□□□ 0.76
SMC6-206ENST00000446852 ENTPD3O75355 529 aa19.81■□□□□ 0.76
SMC6-206ENST00000446852 DPYDQ12882 1025 aa19.81■□□□□ 0.76
SMC6-206ENST00000446852 SEPT2Q15019 361 aa19.81■□□□□ 0.76
SMC6-206ENST00000446852 SIAH1Q8IUQ4 282 aa19.81■□□□□ 0.76
SMC6-206ENST00000446852 CACTINQ8WUQ7 758 aaKnown RBP19.81■□□□□ 0.76
SMC6-206ENST00000446852 STAMQ92783 540 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms