RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KRT83P78385 493 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 NNTQ13423 1086 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 CCDC96Q2M329 555 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 RNPC3Q96LT9 517 aaKnown RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 DNAJC7Q99615 494 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 NHEJ1Q9H9Q4 299 aaPredicted RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 CAPN6Q9Y6Q1 641 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 SSBP05455 408 aaKnown RBP eCLIP15.6■□□□□ 0.09
VPS52-212ENST00000445902 PLEKP08567 350 aaPredicted RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 PDE6AP16499 860 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 TRIM21P19474 475 aaKnown RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 DNA2P51530 1060 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 METTL24Q5JXM2 366 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 B4GALNT4Q76KP1 1039 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 CREG2Q8IUH2 290 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 AMOTL1Q8IY63 956 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 ZKSCAN4Q969J2 545 aaPredicted RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 FAM89AQ96GI7 184 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 ARMT1Q9H993 441 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 TBC1D2BQ9UPU7 963 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 TJP1Q07157 1748 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 ESYT3A0FGR9 886 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 PRKAB2O43741 272 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 RDXP35241 583 aaKnown RBP15.6■□□□□ 0.09
VPS52-212ENST00000445902 PTGDRQ13258 359 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 EHBP1Q8NDI1 1231 aa15.6■□□□□ 0.09
VPS52-212ENST00000445902 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 NCK2O43639 380 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 MOCS3O95396 460 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 NAA35Q5VZE5 725 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 IQCEQ6IPM2 695 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 MFSD6Q6ZSS7 791 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 IFNL3Q8IZI9 196 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 SPATA4Q8NEY3 305 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
VPS52-212ENST00000445902 MBD4O95243 580 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 LSP1P33241 339 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 CYLC1P35663 651 aaPredicted RBP15.59■□□□□ 0.09
VPS52-212ENST00000445902 IFT88Q13099 833 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 CCDC43Q96MW1 224 aaKnown RBP15.59■□□□□ 0.09
VPS52-212ENST00000445902 STRBPQ96SI9 672 aaKnown RBP15.59■□□□□ 0.09
VPS52-212ENST00000445902 MYH2Q9UKX2 1941 aa15.59■□□□□ 0.09
VPS52-212ENST00000445902 ZPR1O75312 459 aa15.58■□□□□ 0.09
VPS52-212ENST00000445902 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.09
VPS52-212ENST00000445902 KIF5AQ12840 1032 aa15.58■□□□□ 0.09
VPS52-212ENST00000445902 FANCBQ8NB91 859 aa15.58■□□□□ 0.09
VPS52-212ENST00000445902 CAPN11Q9UMQ6 739 aa15.58■□□□□ 0.09
VPS52-212ENST00000445902 SNX12Q9UMY4 172 aa15.58■□□□□ 0.09
VPS52-212ENST00000445902 PKD1L3Q7Z443 1732 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 LGALS16A8MUM7 142 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 GUCY2FP51841 1108 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 NAP1L1P55209 391 aaKnown RBP15.58■□□□□ 0.08
VPS52-212ENST00000445902 CABP4P57796 275 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 CCDC181Q5TID7 509 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 ZNF654Q8IZM8 581 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 ANKRD13CQ8N6S4 541 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 IFT81Q8WYA0 676 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 PLIN2Q99541 437 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 SLIT3O75094 1523 aa15.58■□□□□ 0.08
VPS52-212ENST00000445902 ERICH2A1L162 156 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 ZNF263O14978 683 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 FSBPO95073 299 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 RPN1P04843 607 aaKnown RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 FAM153BP0C7A2 387 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 TATP17735 454 aaPredicted RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 KRT2P35908 639 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 EPHB4P54760 987 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 KCTD19Q17RG1 926 aaPredicted RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 FAM153CQ494X1 144 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 AKNAD1Q5T1N1 836 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 N4BP2L2Q92802 583 aaPredicted RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 TRIM47Q96LD4 638 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 ZNHIT6Q9NWK9 470 aaKnown RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 ARHGAP23Q9P227 1491 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 SKOR1P84550 965 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 ZNF658Q5TYW1 1059 aaPredicted RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 HAUS3Q68CZ6 603 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 CEP57Q86XR8 500 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 ZNF473Q8WTR7 871 aaKnown RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 ORAI2Q96SN7 254 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 STIM2Q9P246 746 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 PARP4Q9UKK3 1724 aaKnown RBP15.57■□□□□ 0.08
VPS52-212ENST00000445902 MCM7P33993 719 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 PHKA1P46020 1223 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 PDXDC2PQ6P474 469 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 IFNL2Q8IZJ0 200 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 MMGT1Q8N4V1 131 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 KLC4Q9NSK0 619 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 NFU1Q9UMS0 254 aa15.57■□□□□ 0.08
VPS52-212ENST00000445902 ANO9A1A5B4 782 aa15.56■□□□□ 0.08
VPS52-212ENST00000445902 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
VPS52-212ENST00000445902 CYP27B1O15528 508 aa15.56■□□□□ 0.08
VPS52-212ENST00000445902 HPDP32754 393 aaPredicted RBP15.56■□□□□ 0.08
VPS52-212ENST00000445902 MAGEB6Q8N7X4 407 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms