RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 TTC22Q5TAA0 569 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CASC1Q6TDU7 716 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 TSHZ1Q6ZSZ6 1077 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 NBPF11Q86T75 865 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 PNMA8AQ86V59 439 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 MAGEB6Q8N7X4 407 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CEP120Q8N960 986 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 PI4K2BQ8TCG2 481 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 GMLQ99445 158 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 ANTXR1Q9H6X2 564 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 MYOZ2Q9NPC6 264 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 ZNF358Q9NW07 568 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 TMOD2Q9NZR1 351 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 SERPINA10Q9UK55 444 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 MYH13Q9UKX3 1938 aa7.37□□□□□ -1.23
ECHDC1-208ENST00000436638 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 A6NJY4 79 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 HIP1O00291 1037 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 F11P03951 625 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 ZFYP08048 801 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 ZNF280AP59817 542 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 INSM1Q01101 510 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 MECOMQ03112 1051 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 SLC9C2Q5TAH2 1124 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 HHIPL2Q6UWX4 724 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 RINLQ6ZS11 566 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 USP50Q70EL3 339 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 NSUN4Q96CB9 384 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 EDC3Q96F86 508 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 MRIQ9BWK5 157 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 TAF1DQ9H5J8 278 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 GPAMQ9HCL2 828 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 NMRK2Q9NPI5 230 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 KIAA1024Q9UPX6 916 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 PPME1Q9Y570 386 aa7.36□□□□□ -1.23
ECHDC1-208ENST00000436638 SCN9AQ15858 1988 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 MROH7-TTC4A0A0A0MT08 1334 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 SHTN1A0MZ66 631 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 PDE6AP16499 860 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 RFX1P22670 979 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 ADD2P35612 726 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 BTDP43251 543 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 PLA2G4AP47712 749 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 UBE3CQ15386 1083 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 GRIK5Q16478 980 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 DBN1Q16643 649 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 AIDAQ96BJ3 306 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 DCPSQ96C86 337 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 ZDHHC15Q96MV8 337 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 COL25A1Q9BXS0 654 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 NIFKQ9BYG3 293 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 DIAPH3Q9NSV4 1193 aa7.35□□□□□ -1.23
ECHDC1-208ENST00000436638 PSME4Q14997 1843 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 ZNF532Q9HCE3 1301 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 ANKRD62A6NC57 917 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 WNT10BO00744 389 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 CDK2AP1O14519 115 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 RNF113AO15541 343 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 RRP9O43818 475 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 NRDCO43847 1150 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 CALRP27797 417 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 TNNI2P48788 182 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 TNFAIP1Q13829 316 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 FOXR1Q6PIV2 292 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 LDHDQ86WU2 507 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 SKAP1Q86WV1 359 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 TRPM4Q8TD43 1214 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 RUFY2Q8WXA3 655 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 APPBP2Q92624 585 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 CNTNAP3BQ96NU0 1288 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 CNTNAP3Q9BZ76 1288 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 TDRD3Q9H7E2 651 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 VEZTQ9HBM0 779 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 USP40Q9NVE5 1235 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 AATFQ9NY61 560 aaKnown RBP eCLIP7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 WDR90Q96KV7 1748 aa7.34□□□□□ -1.23
ECHDC1-208ENST00000436638 GAKO14976 1311 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 GPR75-ASB3A0A0A6YYF3 556 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 CLRN2A0PK11 232 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 GSPT1P15170 499 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 SDSP20132 328 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 MSX1P28360 303 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 USP5P45974 858 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 MTFR1Q15390 333 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 BMP2KLQ5H9B9 411 aa7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 APOBEC3FQ8IUX4 373 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-208ENST00000436638 TEX11Q8IYF3 940 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms