RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PLXNA1Q9UIW2 1896 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 NMT2O60551 498 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 PGK2P07205 417 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 FGRP09769 529 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 SLFN13Q68D06 897 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 SLC5A4Q9NY91 659 aa21.92■■□□□ 1.1
NUP50-207ENST00000424634 RBM27Q9P2N5 1060 aaKnown RBP21.92■■□□□ 1.1
NUP50-207ENST00000424634 HSPD1P10809 573 aaKnown RBP21.91■■□□□ 1.1
NUP50-207ENST00000424634 FXR1P51114 621 aaKnown RBP eCLIP21.91■■□□□ 1.1
NUP50-207ENST00000424634 KIFC2Q96AC6 838 aa21.91■■□□□ 1.1
NUP50-207ENST00000424634 FEM1BQ9UK73 627 aa21.91■■□□□ 1.1
NUP50-207ENST00000424634 SZT2Q5T011 3432 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 BMP3P12645 472 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 SDSP20132 328 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 ZNF792Q3KQV3 632 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 SNRNP48Q6IEG0 339 aaKnown RBP21.9■■□□□ 1.1
NUP50-207ENST00000424634 C7orf61Q8IZ16 206 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 CPXCR1Q8N123 301 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 CHMP4CQ96CF2 233 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 TEX13BQ9BXU2 312 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 SLC38A10Q9HBR0 1119 aa21.9■■□□□ 1.1
NUP50-207ENST00000424634 TSPY2A6NKD2 308 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 ATP2A1O14983 1001 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 ORC4O43929 436 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 RANBP6O60518 1105 aaKnown RBP21.89■■□□□ 1.09
NUP50-207ENST00000424634 MSCO60682 206 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 ZBED4O75132 1171 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 KCTD2Q14681 263 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 ANO1Q5XXA6 986 aa21.89■■□□□ 1.09
NUP50-207ENST00000424634 RAVER2Q9HCJ3 691 aaKnown RBP21.89■■□□□ 1.09
NUP50-207ENST00000424634 CCDC171Q6TFL3 1326 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 MCCP23508 829 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 COPB2P35606 906 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 NOVP48745 357 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 ZMYND8Q9ULU4 1186 aaPredicted RBP21.88■■□□□ 1.09
NUP50-207ENST00000424634 STX8Q9UNK0 236 aa21.88■■□□□ 1.09
NUP50-207ENST00000424634 DIS3Q9Y2L1 958 aaKnown RBP21.88■■□□□ 1.09
NUP50-207ENST00000424634 TMEM232C9JQI7 657 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 SEPT4O43236 478 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 SLC4A3P48751 1232 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 LRRC26Q2I0M4 334 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 RASGRP2Q7LDG7 609 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 TINF2Q9BSI4 451 aa21.87■■□□□ 1.09
NUP50-207ENST00000424634 TAL1P17542 331 aaPredicted RBP21.86■■□□□ 1.09
NUP50-207ENST00000424634 HAND2P61296 217 aa21.86■■□□□ 1.09
NUP50-207ENST00000424634 SENP6Q9GZR1 1112 aaPredicted RBP21.86■■□□□ 1.09
NUP50-207ENST00000424634 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
NUP50-207ENST00000424634 ZMYM6O95789 1325 aa21.85■■□□□ 1.09
NUP50-207ENST00000424634 DNAJC25-GNG10A0A024R161 153 aa21.85■■□□□ 1.09
NUP50-207ENST00000424634 SLC1A4P43007 532 aa21.85■■□□□ 1.09
NUP50-207ENST00000424634 IRX6P78412 446 aaPredicted RBP21.85■■□□□ 1.09
NUP50-207ENST00000424634 RRP12Q5JTH9 1297 aaKnown RBP21.85■■□□□ 1.09
NUP50-207ENST00000424634 GJC2Q5T442 439 aaPredicted RBP21.85■■□□□ 1.09
NUP50-207ENST00000424634 KCTD1Q719H9 257 aa21.85■■□□□ 1.09
NUP50-207ENST00000424634 STAG1Q8WVM7 1258 aa21.85■■□□□ 1.09
NUP50-207ENST00000424634 CTDP1Q9Y5B0 961 aaPredicted RBP21.85■■□□□ 1.09
NUP50-207ENST00000424634 DNM1LO00429 736 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 SYN1P17600 705 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 PDE4AP27815 886 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 STAT2P52630 851 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 RCSD1Q6JBY9 416 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 CWC27Q6UX04 472 aaKnown RBP21.84■■□□□ 1.09
NUP50-207ENST00000424634 CHURC1Q8WUH1 139 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 TOMM22Q9NS69 142 aa21.84■■□□□ 1.09
NUP50-207ENST00000424634 ZNF536O15090 1300 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 LAMA3Q16787 3333 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 PLA2G6O60733 806 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 ZNF865P0CJ78 1059 aaPredicted RBP21.83■■□□□ 1.09
NUP50-207ENST00000424634 OAZ1P54368 228 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.83■■□□□ 1.09
NUP50-207ENST00000424634 FAM160B2Q86V87 743 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 DDX11Q96FC9 970 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 GDF15Q99988 308 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 TCP11L1Q9NUJ3 509 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 NRBP1Q9UHY1 535 aa21.83■■□□□ 1.09
NUP50-207ENST00000424634 ISY1Q9ULR0 285 aaKnown RBP21.83■■□□□ 1.09
NUP50-207ENST00000424634 FDX1P10109 184 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 SNAP25P60880 206 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 AKNAD1Q5T1N1 836 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 TBC1D10CQ8IV04 446 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 ARRDC4Q8NCT1 418 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 FGD4Q96M96 766 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 AGBL1Q96MI9 1066 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 MTMR7Q9Y216 660 aa21.82■■□□□ 1.08
NUP50-207ENST00000424634 SNAI1O95863 264 aaPredicted RBP21.81■■□□□ 1.08
NUP50-207ENST00000424634 ATN1P54259 1190 aaPredicted RBP21.81■■□□□ 1.08
NUP50-207ENST00000424634 MFAP1P55081 439 aaKnown RBP21.81■■□□□ 1.08
NUP50-207ENST00000424634 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
NUP50-207ENST00000424634 CHST13Q8NET6 341 aa21.81■■□□□ 1.08
NUP50-207ENST00000424634 TMEM47Q9BQJ4 181 aa21.81■■□□□ 1.08
NUP50-207ENST00000424634 PRR12Q9ULL5 1215 aa21.81■■□□□ 1.08
NUP50-207ENST00000424634 MCM3APO60318 1980 aa21.81■■□□□ 1.08
NUP50-207ENST00000424634 IKQ13123 557 aaPredicted RBP21.8■■□□□ 1.08
NUP50-207ENST00000424634 LRRC41Q15345 812 aa21.8■■□□□ 1.08
NUP50-207ENST00000424634 TTBK2Q6IQ55 1244 aa21.8■■□□□ 1.08
NUP50-207ENST00000424634 MFSD6Q6ZSS7 791 aa21.8■■□□□ 1.08
NUP50-207ENST00000424634 ANKRD35Q8N283 1001 aa21.8■■□□□ 1.08
NUP50-207ENST00000424634 HOMER2Q9NSB8 354 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms