RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 ZBED4O75132 1171 aa30.25■■■□□ 2.43
SMDT1-202ENST00000422252 PGK2P07205 417 aa30.25■■■□□ 2.43
SMDT1-202ENST00000422252 KIFC2Q96AC6 838 aa30.25■■■□□ 2.43
SMDT1-202ENST00000422252 CTDP1Q9Y5B0 961 aaPredicted RBP30.25■■■□□ 2.43
SMDT1-202ENST00000422252 ZNFX1Q9P2E3 1918 aaKnown RBP30.24■■■□□ 2.43
SMDT1-202ENST00000422252 ATP2A1O14983 1001 aa30.24■■■□□ 2.43
SMDT1-202ENST00000422252 BMP3P12645 472 aa30.24■■■□□ 2.43
SMDT1-202ENST00000422252 ZNF589Q86UQ0 364 aaPredicted RBP30.24■■■□□ 2.43
SMDT1-202ENST00000422252 PRO3102Q9H379 93 aa30.24■■■□□ 2.43
SMDT1-202ENST00000422252 DIS3Q9Y2L1 958 aaKnown RBP30.24■■■□□ 2.43
SMDT1-202ENST00000422252 SUPT16HQ9Y5B9 1047 aaKnown RBP30.24■■■□□ 2.43
SMDT1-202ENST00000422252 TACC3Q9Y6A5 838 aa30.24■■■□□ 2.43
SMDT1-202ENST00000422252 FGAP02671 866 aa30.23■■■□□ 2.43
SMDT1-202ENST00000422252 HSPD1P10809 573 aaKnown RBP30.23■■■□□ 2.43
SMDT1-202ENST00000422252 ZNF792Q3KQV3 632 aa30.23■■■□□ 2.43
SMDT1-202ENST00000422252 SLC38A10Q9HBR0 1119 aa30.23■■■□□ 2.43
SMDT1-202ENST00000422252 STX8Q9UNK0 236 aa30.23■■■□□ 2.43
SMDT1-202ENST00000422252 RIPK3Q9Y572 518 aa30.23■■■□□ 2.43
SMDT1-202ENST00000422252 SEPT4O43236 478 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 ORC4O43929 436 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 RANBP6O60518 1105 aaKnown RBP30.22■■■□□ 2.43
SMDT1-202ENST00000422252 PRAMEF19Q5SWL8 479 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 CPXCR1Q8N123 301 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 IL17RBQ9NRM6 502 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 ZMYM6O95789 1325 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 CCDC171Q6TFL3 1326 aa30.22■■■□□ 2.43
SMDT1-202ENST00000422252 FGRP09769 529 aa30.21■■■□□ 2.43
SMDT1-202ENST00000422252 GMCL1Q96IK5 515 aa30.21■■■□□ 2.43
SMDT1-202ENST00000422252 RAVER2Q9HCJ3 691 aaKnown RBP30.21■■■□□ 2.43
SMDT1-202ENST00000422252 NRBP1Q9UHY1 535 aa30.21■■■□□ 2.43
SMDT1-202ENST00000422252 TMEM232C9JQI7 657 aa30.2■■■□□ 2.43
SMDT1-202ENST00000422252 DNM1LO00429 736 aa30.2■■■□□ 2.43
SMDT1-202ENST00000422252 NMT2O60551 498 aa30.2■■■□□ 2.43
SMDT1-202ENST00000422252 SDSP20132 328 aa30.2■■■□□ 2.43
SMDT1-202ENST00000422252 TINF2Q9BSI4 451 aa30.2■■■□□ 2.43
SMDT1-202ENST00000422252 ISY1Q9ULR0 285 aaKnown RBP30.2■■■□□ 2.43
SMDT1-202ENST00000422252 ZMYND8Q9ULU4 1186 aaPredicted RBP30.2■■■□□ 2.43
SMDT1-202ENST00000422252 FDX1P10109 184 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 SLC1A4P43007 532 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 SLC4A3P48751 1232 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 STAT2P52630 851 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 OAZ1P54368 228 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 LRRC26Q2I0M4 334 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 SENP6Q9GZR1 1112 aaPredicted RBP30.19■■■□□ 2.42
SMDT1-202ENST00000422252 TOMM22Q9NS69 142 aa30.19■■■□□ 2.42
SMDT1-202ENST00000422252 MCCP23508 829 aa30.18■■■□□ 2.42
SMDT1-202ENST00000422252 MFAP1P55081 439 aaKnown RBP30.18■■■□□ 2.42
SMDT1-202ENST00000422252 ANO1Q5XXA6 986 aa30.18■■■□□ 2.42
SMDT1-202ENST00000422252 FAM160B2Q86V87 743 aa30.18■■■□□ 2.42
SMDT1-202ENST00000422252 ARRDC4Q8NCT1 418 aa30.18■■■□□ 2.42
SMDT1-202ENST00000422252 CHURC1Q8WUH1 139 aa30.18■■■□□ 2.42
SMDT1-202ENST00000422252 PLXNA1Q9UIW2 1896 aa30.17■■■□□ 2.42
SMDT1-202ENST00000422252 TRIOBPQ9H2D6 2365 aa30.17■■■□□ 2.42
SMDT1-202ENST00000422252 NOVP48745 357 aa30.17■■■□□ 2.42
SMDT1-202ENST00000422252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.17■■■□□ 2.42
SMDT1-202ENST00000422252 STAG1Q8WVM7 1258 aa30.17■■■□□ 2.42
SMDT1-202ENST00000422252 DDX11Q96FC9 970 aa30.17■■■□□ 2.42
SMDT1-202ENST00000422252 SYN1P17600 705 aa30.16■■■□□ 2.42
SMDT1-202ENST00000422252 IKQ13123 557 aaPredicted RBP30.16■■■□□ 2.42
SMDT1-202ENST00000422252 RRP12Q5JTH9 1297 aaKnown RBP30.16■■■□□ 2.42
SMDT1-202ENST00000422252 GJC2Q5T442 439 aaPredicted RBP30.16■■■□□ 2.42
SMDT1-202ENST00000422252 CHMP4CQ96CF2 233 aa30.16■■■□□ 2.42
SMDT1-202ENST00000422252 FBXO40Q9UH90 709 aa30.16■■■□□ 2.42
SMDT1-202ENST00000422252 PLA2G6O60733 806 aa30.15■■■□□ 2.42
SMDT1-202ENST00000422252 RCSD1Q6JBY9 416 aa30.15■■■□□ 2.42
SMDT1-202ENST00000422252 MSL3Q8N5Y2 521 aaKnown RBP30.15■■■□□ 2.42
SMDT1-202ENST00000422252 CHST13Q8NET6 341 aa30.15■■■□□ 2.42
SMDT1-202ENST00000422252 RANBP2P49792 3224 aaKnown RBP30.15■■■□□ 2.42
SMDT1-202ENST00000422252 DNAJC25-GNG10A0A024R161 153 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 A0A1W2PPC1 479 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 KBTBD13C9JR72 458 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 HAND2P61296 217 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 KCTD1Q719H9 257 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 GDF15Q99988 308 aa30.14■■■□□ 2.42
SMDT1-202ENST00000422252 TAL1P17542 331 aaPredicted RBP30.13■■■□□ 2.41
SMDT1-202ENST00000422252 ANKRD35Q8N283 1001 aa30.13■■■□□ 2.41
SMDT1-202ENST00000422252 DIAPH3Q9NSV4 1193 aa30.13■■■□□ 2.41
SMDT1-202ENST00000422252 TCP11L1Q9NUJ3 509 aa30.13■■■□□ 2.41
SMDT1-202ENST00000422252 CNPY2Q9Y2B0 182 aa30.13■■■□□ 2.41
SMDT1-202ENST00000422252 HIP1O00291 1037 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 PCP11498 1178 aaKnown RBP30.12■■■□□ 2.41
SMDT1-202ENST00000422252 AKNAD1Q5T1N1 836 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 CWC27Q6UX04 472 aaKnown RBP30.12■■■□□ 2.41
SMDT1-202ENST00000422252 MFSD6Q6ZSS7 791 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 PCDH10Q9P2E7 1040 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 MTMR7Q9Y216 660 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 SYNGAP1Q96PV0 1343 aa30.12■■■□□ 2.41
SMDT1-202ENST00000422252 ZNF865P0CJ78 1059 aaPredicted RBP30.11■■■□□ 2.41
SMDT1-202ENST00000422252 RARBP10826 455 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 BMP8BP34820 402 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 ATN1P54259 1190 aaPredicted RBP30.11■■■□□ 2.41
SMDT1-202ENST00000422252 MAMDC4Q6UXC1 1216 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 RASGRP2Q7LDG7 609 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 ZNF467Q7Z7K2 595 aaPredicted RBP30.11■■■□□ 2.41
SMDT1-202ENST00000422252 DCAF4Q8WV16 495 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 HOMER2Q9NSB8 354 aa30.11■■■□□ 2.41
SMDT1-202ENST00000422252 MYCNP04198 464 aaPredicted RBP30.1■■■□□ 2.41
SMDT1-202ENST00000422252 LRRC41Q15345 812 aa30.1■■■□□ 2.41
SMDT1-202ENST00000422252 ACAD9Q9H845 621 aa30.1■■■□□ 2.41
SMDT1-202ENST00000422252 ZNF536O15090 1300 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms