RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 SECISBP2LQ93073 1101 aaKnown RBP18.61■□□□□ 0.57
PKP4-204ENST00000421462 MAGEC2Q9UBF1 373 aaPredicted RBP18.61■□□□□ 0.57
PKP4-204ENST00000421462 RWDD2AQ9UIY3 292 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 SSBP05455 408 aaKnown RBP eCLIP18.61■□□□□ 0.57
PKP4-204ENST00000421462 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
PKP4-204ENST00000421462 KRT83P78385 493 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 GUCY1A3Q02108 690 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 KIF5AQ12840 1032 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 SDR42E1Q8WUS8 393 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 CD248Q9HCU0 757 aa18.61■□□□□ 0.57
PKP4-204ENST00000421462 MOCS3O95396 460 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 RPN1P04843 607 aaKnown RBP18.6■□□□□ 0.57
PKP4-204ENST00000421462 SETQ01105 290 aaPredicted RBP18.6■□□□□ 0.57
PKP4-204ENST00000421462 PAPD7Q5XG87 772 aaKnown RBP18.6■□□□□ 0.57
PKP4-204ENST00000421462 LCORLQ8N3X6 602 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 KRT23Q9C075 422 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 MTMR7Q9Y216 660 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 SEMA3EO15041 775 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
PKP4-204ENST00000421462 GUCY2FP51841 1108 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 TRIM14Q14142 442 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 FAM212AQ96EL1 285 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 GRIN2DO15399 1336 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 PP2D1A8MPX8 630 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 HSF2BPO75031 334 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 UBE3CQ15386 1083 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 IRF2BP1Q8IU81 584 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 CAPN6Q9Y6Q1 641 aa18.6■□□□□ 0.57
PKP4-204ENST00000421462 MYO5AQ9Y4I1 1855 aaKnown RBP18.59■□□□□ 0.57
PKP4-204ENST00000421462 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 ATP2C2O75185 946 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 SEC24CP53992 1094 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 TBC1D8BQ0IIM8 1120 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 TTMPQ5BVD1 217 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 MST1RQ04912 1400 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 TARSL2A2RTX5 802 aaKnown RBP18.59■□□□□ 0.57
PKP4-204ENST00000421462 ZSCAN5CA6NGD5 496 aaPredicted RBP18.59■□□□□ 0.57
PKP4-204ENST00000421462 GSG1L2A8MUP6 293 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 SHOX2O60902 331 aaPredicted RBP18.59■□□□□ 0.57
PKP4-204ENST00000421462 STAT6P42226 847 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 SF3A3Q12874 501 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■■■□ 23.1
PKP4-204ENST00000421462 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
PKP4-204ENST00000421462 CT47A1Q5JQC4 288 aaPredicted RBP18.59■□□□□ 0.57
PKP4-204ENST00000421462 TNKSO95271 1327 aa18.58■□□□□ 0.57
PKP4-204ENST00000421462 FECHP22830 423 aa18.58■□□□□ 0.57
PKP4-204ENST00000421462 SPA17Q15506 151 aa18.58■□□□□ 0.57
PKP4-204ENST00000421462 CCDC42Q96M95 316 aa18.58■□□□□ 0.57
PKP4-204ENST00000421462 CNNM2Q9H8M5 875 aa18.58■□□□□ 0.57
PKP4-204ENST00000421462 HPDP32754 393 aaPredicted RBP18.58■□□□□ 0.56
PKP4-204ENST00000421462 CEP89Q96ST8 783 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 MEGF6O75095 1541 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 LRRC10BA6NIK2 292 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 ADAMTS3O15072 1205 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 ECM2O94769 699 aaPredicted RBP18.58■□□□□ 0.56
PKP4-204ENST00000421462 NNTQ13423 1086 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 ZNF658Q5TYW1 1059 aaPredicted RBP18.58■□□□□ 0.56
PKP4-204ENST00000421462 AENQ8WTP8 325 aaKnown RBP18.58■□□□□ 0.56
PKP4-204ENST00000421462 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 MS4A14Q96JA4 679 aa18.58■□□□□ 0.56
PKP4-204ENST00000421462 OPA1O60313 960 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
PKP4-204ENST00000421462 USP8P40818 1118 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 MTIF2P46199 727 aaKnown RBP18.57■□□□□ 0.56
PKP4-204ENST00000421462 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 SPATA4Q8NEY3 305 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 ECM29Q5VYK3 1845 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.567e-8■□□□□ 10.2
PKP4-204ENST00000421462 BUB1O43683 1085 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 NLRP5P59047 1200 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 GBP6Q6ZN66 633 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 EHBP1Q8NDI1 1231 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 RASGRP4Q8TDF6 673 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 CCDC43Q96MW1 224 aaKnown RBP18.57■□□□□ 0.56
PKP4-204ENST00000421462 ZIM3Q96PE6 472 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
PKP4-204ENST00000421462 LGALS16A8MUM7 142 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 BACH1O14867 736 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 ACTN3Q08043 901 aaPredicted RBP18.56■□□□□ 0.56
PKP4-204ENST00000421462 ABCF2Q9UG63 623 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
PKP4-204ENST00000421462 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 IFT88Q13099 833 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 PKN1Q16512 942 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 TICAM2Q86XR7 235 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 RPGRIP1Q96KN7 1286 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 TUBGCP2Q9BSJ2 902 aa18.56■□□□□ 0.56
PKP4-204ENST00000421462 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms