RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 HOMER1Q86YM7 354 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 SPACA3Q8IXA5 215 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 CRACR2BQ8N4Y2 399 aaPredicted RBP6.26□□□□□ -1.41
LINC01646-201ENST00000420522 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 APPBP2Q92624 585 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 SLC26A8Q96RN1 970 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
LINC01646-201ENST00000420522 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
LINC01646-201ENST00000420522 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 IGHA1P01876 353 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 CEACAM5P06731 702 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 ITIH2P19823 946 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 GRB10Q13322 594 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 PPP2R5DQ14738 602 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 PLEKHG4Q58EX7 1191 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 TMEM67Q5HYA8 995 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 AARSD1Q9BTE6 412 aaKnown RBP6.25□□□□□ -1.41
LINC01646-201ENST00000420522 HDAC8Q9BY41 377 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 PIM2Q9P1W9 311 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 MINPP1Q9UNW1 487 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 PLAGL2Q9UPG8 496 aa6.25□□□□□ -1.41
LINC01646-201ENST00000420522 SF3B6Q9Y3B4 125 aaKnown RBP6.25□□□□□ -1.41
LINC01646-201ENST00000420522 TRAV20A0A0B4J274 112 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 CYP26A1O43174 497 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 KCNH1O95259 989 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 FGFR1P11362 822 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 GRIA2P42262 883 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 CTSKP43235 329 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 CLCN7P51798 805 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 CDKAL1Q5VV42 579 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 FOXB2Q5VYV0 432 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 C16orf86Q6ZW13 317 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 TSPYL5Q86VY4 417 aaPredicted RBP6.24□□□□□ -1.41
LINC01646-201ENST00000420522 ZNF655Q8N720 491 aaPredicted RBP6.24□□□□□ -1.41
LINC01646-201ENST00000420522 TRIT1Q9H3H1 467 aaKnown RBP6.24□□□□□ -1.41
LINC01646-201ENST00000420522 GPATCH2Q9NW75 528 aa6.24□□□□□ -1.41
LINC01646-201ENST00000420522 SBNO2Q9Y2G9 1366 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 CCDC163A0A0D9SF12 145 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 H0Y8X5 98 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 MEIS1O00470 390 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 CLSTN1O94985 981 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 GSNP06396 782 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 FOSL1P15407 271 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 IFI16Q16666 785 aaKnown RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 YOD1Q5VVQ6 348 aaPredicted RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 GTF2IRD2BQ6EKJ0 949 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 ZNF662Q6ZS27 426 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 KIAA0907Q7Z7F0 614 aaPredicted RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 GTF2IRD2Q86UP8 949 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 PLD6Q8N2A8 252 aaKnown RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 SYNPOQ8N3V7 929 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 NETO1Q8TDF5 533 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 BTN2A2Q8WVV5 523 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 EXOC2Q96KP1 924 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 HSPA12BQ96MM6 686 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 ZDHHC15Q96MV8 337 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 DHRS4Q9BTZ2 278 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 NKX2-4Q9H2Z4 354 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 ZC3H7BQ9UGR2 993 aaKnown RBP6.23□□□□□ -1.41
LINC01646-201ENST00000420522 SNX11Q9Y5W9 270 aa6.23□□□□□ -1.41
LINC01646-201ENST00000420522 TMEM265A0A087WTH1 108 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 PRODHO43272 600 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 PABPC1P11940 636 aaKnown RBP6.22□□□□□ -1.41
LINC01646-201ENST00000420522 HOXC12P31275 282 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 L1CAMP32004 1257 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 AMPD2Q01433 879 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 GAB4Q2WGN9 574 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 FAM209AQ5JX71 171 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 CWF19L1Q69YN2 538 aaKnown RBP6.22□□□□□ -1.41
LINC01646-201ENST00000420522 OSBP2Q969R2 916 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 TCTN2Q96GX1 697 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 CCDC140Q96MF4 163 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 CDC6Q99741 560 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 CYP26B1Q9NR63 512 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 SEMA3GQ9NS98 782 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 ZSWIM5Q9P217 1185 aa6.22□□□□□ -1.41
LINC01646-201ENST00000420522 TRBV23-1A0A0A0MS06 115 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 WASH4PA8MWX3 477 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 H3BS24 57 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 VAMP4O75379 141 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 TPP2P29144 1249 aaPredicted RBP6.21□□□□□ -1.42
LINC01646-201ENST00000420522 BMP8BP34820 402 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 GFRA1P56159 465 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 POU4F1Q01851 419 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 TCEA2Q15560 299 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 CRTC3Q6UUV7 619 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 UBE2FQ969M7 185 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 FEZ1Q99689 392 aa6.21□□□□□ -1.42
LINC01646-201ENST00000420522 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC01646-201ENST00000420522 GPR55Q9Y2T6 319 aaPredicted RBP6.21□□□□□ -1.42
LINC01646-201ENST00000420522 MRPS23Q9Y3D9 190 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms