RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 NUCB1Q02818 461 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 AAMPQ13685 434 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 MCMDC2Q4G0Z9 681 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 RRP12Q5JTH9 1297 aaKnown RBP11.93□□□□□ -0.5
PKP4-203ENST00000411900 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 SNRNP48Q6IEG0 339 aaKnown RBP11.93□□□□□ -0.5
PKP4-203ENST00000411900 RASGRP2Q7LDG7 609 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 RAVER2Q9HCJ3 691 aaKnown RBP11.93□□□□□ -0.5
PKP4-203ENST00000411900 TOMM22Q9NS69 142 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■■□ 23.2
PKP4-203ENST00000411900 RIPK3Q9Y572 518 aa11.93□□□□□ -0.5
PKP4-203ENST00000411900 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
PKP4-203ENST00000411900 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
PKP4-203ENST00000411900 HAND2P61296 217 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 KCTD2Q14681 263 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 ABRAQ8N0Z2 381 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
PKP4-203ENST00000411900 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 MKL1Q969V6 931 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 SLC5A4Q9NY91 659 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
PKP4-203ENST00000411900 CCDC171Q6TFL3 1326 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 TRIOBPQ9H2D6 2365 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 MCM3APO60318 1980 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 TMEM232C9JQI7 657 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 ZBED4O75132 1171 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 IGHA2P01877 340 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 FGAP02671 866 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
PKP4-203ENST00000411900 COL6A1P12109 1028 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 BMP3P12645 472 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 SDSP20132 328 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 MCCP23508 829 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 SNAP25P60880 206 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 IKQ13123 557 aaPredicted RBP11.91□□□□□ -0.5
PKP4-203ENST00000411900 LRRC26Q2I0M4 334 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
PKP4-203ENST00000411900 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
PKP4-203ENST00000411900 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 FEM1BQ9UK73 627 aa11.91□□□□□ -0.5
PKP4-203ENST00000411900 DNAH12Q6ZR08 3092 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 MSCO60682 206 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.5
PKP4-203ENST00000411900 SLC1A4P43007 532 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
PKP4-203ENST00000411900 ALX1Q15699 326 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 ZNF792Q3KQV3 632 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.5
PKP4-203ENST00000411900 KCTD1Q719H9 257 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 SLC38A10Q9HBR0 1119 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 HOMER2Q9NSB8 354 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
PKP4-203ENST00000411900 RANBP2P49792 3224 aaKnown RBP11.89□□□□□ -0.51
PKP4-203ENST00000411900 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 SEPT4O43236 478 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 COPB2P35606 906 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 STAT2P52630 851 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 LENG1Q96BZ8 264 aaPredicted RBP11.89□□□□□ -0.51
PKP4-203ENST00000411900 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 TINF2Q9BSI4 451 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
PKP4-203ENST00000411900 DNM1LO00429 736 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 ORC4O43929 436 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 TBC1D10CQ8IV04 446 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 ANKRD35Q8N283 1001 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 AGBL1Q96MI9 1066 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 SYNPO2Q9UMS6 1093 aa11.88□□□□□ -0.51
PKP4-203ENST00000411900 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
PKP4-203ENST00000411900 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 ATP2A1O14983 1001 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 PGK1P00558 417 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 PDE4AP27815 886 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 SLC16A2P36021 539 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 TTBK2Q6IQ55 1244 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
PKP4-203ENST00000411900 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
PKP4-203ENST00000411900 ZNF536O15090 1300 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 NEDD4P46934 1319 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 FGRP09769 529 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
PKP4-203ENST00000411900 ALAS1P13196 640 aa11.86□□□□□ -0.51
PKP4-203ENST00000411900 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
PKP4-203ENST00000411900 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
PKP4-203ENST00000411900 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
PKP4-203ENST00000411900 LRRC41Q15345 812 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms