RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PKN2Q16513 984 aaKnown RBP20.64■□□□□ 0.89
CTNS-203ENST00000399306 KCTD1Q719H9 257 aa20.64■□□□□ 0.89
CTNS-203ENST00000399306 RUFY3Q7L099 469 aa20.64■□□□□ 0.89
CTNS-203ENST00000399306 BTBD7Q9P203 1132 aa20.64■□□□□ 0.89
CTNS-203ENST00000399306 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
CTNS-203ENST00000399306 PALM3A6NDB9 673 aaPredicted RBP20.63■□□□□ 0.89
CTNS-203ENST00000399306 CCDC69A6NI79 296 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 SLC25A27O95847 323 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 HOXD10P28358 340 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 COL9A3Q14050 684 aaPredicted RBP20.63■□□□□ 0.89
CTNS-203ENST00000399306 GRM4Q14833 912 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 CTU1Q7Z7A3 348 aaKnown RBP20.63■□□□□ 0.89
CTNS-203ENST00000399306 ZNF654Q8IZM8 581 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 CD99L2Q8TCZ2 262 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 SPATC1LQ9H0A9 340 aa20.63■□□□□ 0.89
CTNS-203ENST00000399306 ZNF214Q9UL59 606 aaPredicted RBP20.63■□□□□ 0.89
CTNS-203ENST00000399306 SMARCA1P28370 1054 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 PSMC4P43686 418 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
CTNS-203ENST00000399306 TMEM132BQ14DG7 1078 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 PPP2R5BQ15173 497 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 Q3C1V9 767 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 SYDE2Q5VT97 1194 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 ALDH8A1Q9H2A2 487 aaPredicted RBP20.62■□□□□ 0.89
CTNS-203ENST00000399306 EFCC1Q9HA90 598 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 UPF2Q9HAU5 1272 aaKnown RBP20.62■□□□□ 0.89
CTNS-203ENST00000399306 PRR12Q9ULL5 1215 aa20.62■□□□□ 0.89
CTNS-203ENST00000399306 DOCK3Q8IZD9 2030 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 KIF5BP33176 963 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
CTNS-203ENST00000399306 GNAQP50148 359 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 EVCP57679 992 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 SYNE3Q6ZMZ3 975 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.61■□□□□ 0.89
CTNS-203ENST00000399306 RIOX2Q8IUF8 465 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 TEX13BQ9BXU2 312 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
CTNS-203ENST00000399306 MROH8Q9H579 483 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 MAD2L2Q9UI95 211 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 ISY1Q9ULR0 285 aaKnown RBP20.61■□□□□ 0.89
CTNS-203ENST00000399306 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
CTNS-203ENST00000399306 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
CTNS-203ENST00000399306 FRMPD2Q68DX3 1309 aaPredicted RBP20.6■□□□□ 0.89
CTNS-203ENST00000399306 STAT3P40763 770 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 TKFCQ3LXA3 575 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 APOA5Q6Q788 366 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 OTOP1Q7RTM1 612 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 CTCFLQ8NI51 663 aaPredicted RBP20.6■□□□□ 0.89
CTNS-203ENST00000399306 COA7Q96BR5 231 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 LZTS2Q9BRK4 669 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 MOV10L1Q9BXT6 1211 aaKnown RBP20.6■□□□□ 0.89
CTNS-203ENST00000399306 GPCPD1Q9NPB8 672 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
CTNS-203ENST00000399306 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
CTNS-203ENST00000399306 KLRF2D3W0D1 207 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 STRNO43815 780 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
CTNS-203ENST00000399306 FGD1P98174 961 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 TTBK2Q6IQ55 1244 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 RASGRP2Q7LDG7 609 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 ABRAQ8N0Z2 381 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 MAF1Q9H063 256 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 NID2Q14112 1375 aa20.59■□□□□ 0.89
CTNS-203ENST00000399306 TNPO2O14787 897 aaKnown RBP20.58■□□□□ 0.89
CTNS-203ENST00000399306 CTGFP29279 349 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 Q6ZUG5 572 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 CCAR1Q8IX12 1150 aaKnown RBP20.58■□□□□ 0.89
CTNS-203ENST00000399306 SOCS4Q8WXH5 440 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 BACH2Q9BYV9 841 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 C22orf23Q9BZE7 217 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
CTNS-203ENST00000399306 SRRDQ9UH36 339 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 FBXO40Q9UH90 709 aa20.58■□□□□ 0.89
CTNS-203ENST00000399306 ZNF236Q9UL36 1845 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 ICAM1P05362 532 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 CPA1P15085 419 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 TRAF1Q13077 416 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 IRF5Q13568 498 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 PLEKHH3Q7Z736 793 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 FANCBQ8NB91 859 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 CHST13Q8NET6 341 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 MTMR8Q96EF0 704 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 TCEANC2Q96MN5 208 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 PORCNQ9H237 461 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 RIOX1Q9H6W3 641 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 TRIM17Q9Y577 477 aa20.57■□□□□ 0.88
CTNS-203ENST00000399306 ZNF536O15090 1300 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 SLC15A5A6NIM6 579 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 ZBTB43O43298 467 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 GOLGA8HP0CJ92 632 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 SLC16A2P36021 539 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 CAP1Q01518 475 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms