RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 EIF3CQ99613 913 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 TTF2Q9UNY4 1162 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 REXO2Q9Y3B8 237 aaKnown RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 LAMA4Q16363 1823 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 USP17L8P0C7I0 530 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 MS4A14Q96JA4 679 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 ZSCAN5CA6NGD5 496 aaPredicted RBP18.78■□□□□ 0.6
SIPA1-201ENST00000394224 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
SIPA1-201ENST00000394224 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
SIPA1-201ENST00000394224 MAP9Q49MG5 647 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 OR8K1Q8NGG5 319 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.6
SIPA1-201ENST00000394224 AKR1B10O60218 316 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 ADAMTS2O95450 1211 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 PRDX5P30044 214 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 LRRC31Q6UY01 552 aa18.77■□□□□ 0.6
SIPA1-201ENST00000394224 RNF41Q9H4P4 317 aaPredicted RBP18.77■□□□□ 0.6
SIPA1-201ENST00000394224 MED1Q15648 1581 aaPredicted RBP18.77■□□□□ 0.59
SIPA1-201ENST00000394224 PDE4DQ08499 809 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 COG1Q8WTW3 980 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 GOLPH3Q9H4A6 298 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 TECP42680 631 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 ATP6V1AP38606 617 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
SIPA1-201ENST00000394224 C5P01031 1676 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 VGLL2Q8N8G2 317 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 GSDMAQ96QA5 445 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 RUFY1Q96T51 708 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.75■□□□□ 0.59
SIPA1-201ENST00000394224 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
SIPA1-201ENST00000394224 BCCIPQ9P287 314 aaKnown RBP eCLIP18.75■□□□□ 0.59
SIPA1-201ENST00000394224 DMGDHQ9UI17 866 aaKnown RBP18.75■□□□□ 0.59
SIPA1-201ENST00000394224 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
SIPA1-201ENST00000394224 RGPD5Q99666 1765 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 TULP2O00295 520 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 TXKP42681 527 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 PACS2Q86VP3 889 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 TUBGCP2Q9BSJ2 902 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 LRRC1Q9BTT6 524 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
SIPA1-201ENST00000394224 MAP2K7O14733 419 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 GTF2A1P52655 376 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 C3orf67Q6ZVT6 689 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 MARCH10Q8NA82 808 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 GOLGA6CA6NDK9 693 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 MARCH6O60337 910 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 GOLGA6DP0CG33 693 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 HPDP32754 393 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 HERVK_113P62684 666 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 DTHD1Q6ZMT9 781 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 NHEJ1Q9H9Q4 299 aaPredicted RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 GOLGA6AQ9NYA3 693 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 AFDNP55196 1824 aaKnown RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 H0YHG0 523 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 CCNT1O60563 726 aaKnown RBP18.74■□□□□ 0.59
SIPA1-201ENST00000394224 TFAP4Q01664 338 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 SPA17Q15506 151 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 SELENOOQ9BVL4 669 aa18.74■□□□□ 0.59
SIPA1-201ENST00000394224 GOLGA6BA6NDN3 693 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 TTC31Q49AM3 519 aaPredicted RBP18.73■□□□□ 0.59
SIPA1-201ENST00000394224 CDKAL1Q5VV42 579 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 RRAGAQ7L523 313 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 BCAS4Q8TDM0 211 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 STAG1Q8WVM7 1258 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 UBA5Q9GZZ9 404 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 KRT14P02533 472 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 KIF5AQ12840 1032 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 FBXW10Q5XX13 1052 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 TRMT1LQ7Z2T5 733 aaKnown RBP18.73■□□□□ 0.59
SIPA1-201ENST00000394224 KAT14Q9H8E8 782 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 ABCC6O95255 1503 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 STK4Q13043 487 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 PDCLQ13371 301 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 TRIML1Q8N9V2 468 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 PHF20Q9BVI0 1012 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 ACBD3Q9H3P7 528 aa18.73■□□□□ 0.59
SIPA1-201ENST00000394224 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 DIXDC1Q155Q3 683 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 FBXL16Q8N461 479 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 CAPN6Q9Y6Q1 641 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 KRT86O43790 486 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 SCG2P13521 617 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 RNF26Q9BY78 433 aaPredicted RBP18.72■□□□□ 0.59
SIPA1-201ENST00000394224 WDR17Q8IZU2 1322 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 RASSF7Q02833 373 aa18.72■□□□□ 0.59
SIPA1-201ENST00000394224 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
SIPA1-201ENST00000394224 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms