RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 SPAG1Q07617 926 aa24.35■■□□□ 1.49
CLDND1-202ENST00000394180 SYNE4Q8N205 404 aa24.35■■□□□ 1.49
CLDND1-202ENST00000394180 SRP68Q9UHB9 627 aaKnown RBP24.35■■□□□ 1.49
CLDND1-202ENST00000394180 DDX20Q9UHI6 824 aaKnown RBP24.35■■□□□ 1.49
CLDND1-202ENST00000394180 EPN1Q9Y6I3 576 aaPredicted RBP24.35■■□□□ 1.49
CLDND1-202ENST00000394180 C4AP0C0L4 1744 aa24.35■■□□□ 1.49
CLDND1-202ENST00000394180 H7C1W4 665 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 CPLX1O14810 134 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 FAM107AO95990 144 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 SSR1P43307 286 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 CLNS1AP54105 237 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 NLRP10Q86W26 655 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 ZNF473Q8WTR7 871 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 FAM89AQ96GI7 184 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 HPS5Q9UPZ3 1129 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 TNS1Q9HBL0 1735 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 FXR1P51114 621 aaKnown RBP eCLIP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 ADCY2Q08462 1091 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 TRIM28Q13263 835 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 ZMYM1Q5SVZ6 1142 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 VPS37DQ86XT2 251 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 ARHGEF1Q92888 912 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 HOMER3Q9NSC5 361 aa24.34■■□□□ 1.49
CLDND1-202ENST00000394180 LIMA1Q9UHB6 759 aaKnown RBP24.34■■□□□ 1.49
CLDND1-202ENST00000394180 SPEF2Q9C093 1822 aa24.33■■□□□ 1.49
CLDND1-202ENST00000394180 MYBL2P10244 700 aa24.33■■□□□ 1.49
CLDND1-202ENST00000394180 PRLRP16471 622 aa24.33■■□□□ 1.49
CLDND1-202ENST00000394180 KIAA1328Q86T90 577 aa24.33■■□□□ 1.49
CLDND1-202ENST00000394180 PPP1R37O75864 691 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 NDUFA10O95299 355 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 KRT83P78385 493 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 PTGISQ16647 500 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 TNNI3KQ59H18 835 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 PPP4R3AQ6IN85 833 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 SND1Q7KZF4 910 aaKnown RBP eCLIP24.33■■□□□ 1.48
CLDND1-202ENST00000394180 ZNF34Q8IZ26 560 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 DBNLQ9UJU6 430 aaKnown RBP24.33■■□□□ 1.48
CLDND1-202ENST00000394180 FPGT-TNNI3KV9GXZ4 949 aa24.33■■□□□ 1.48
CLDND1-202ENST00000394180 TBC1D8BQ0IIM8 1120 aa24.32■■□□□ 1.48
CLDND1-202ENST00000394180 CUL4BQ13620 913 aa24.32■■□□□ 1.48
CLDND1-202ENST00000394180 TTMPQ5BVD1 217 aa24.32■■□□□ 1.48
CLDND1-202ENST00000394180 NAIF1Q69YI7 327 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-202ENST00000394180 CYB5D1Q6P9G0 228 aa24.32■■□□□ 1.48
CLDND1-202ENST00000394180 SPATS2LQ9NUQ6 558 aaKnown RBP24.32■■□□□ 1.48
CLDND1-202ENST00000394180 ARMC9Q7Z3E5 817 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 FUKQ8N0W3 1084 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 JAKMIP2Q96AA8 810 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 SYNRGQ9UMZ2 1314 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 BIRC2Q13490 618 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 LACTB2Q53H82 288 aaPredicted RBP24.31■■□□□ 1.48
CLDND1-202ENST00000394180 TRMT44Q8IYL2 757 aaKnown RBP24.31■■□□□ 1.48
CLDND1-202ENST00000394180 CPLX3Q8WVH0 158 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 RSRC1Q96IZ7 334 aaKnown RBP24.31■■□□□ 1.48
CLDND1-202ENST00000394180 ANKRD36CQ5JPF3 1778 aa24.31■■□□□ 1.48
CLDND1-202ENST00000394180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 KRT86O43790 486 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 HSPD1P10809 573 aaKnown RBP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 PDCLQ13371 301 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 CCDC121Q6ZUS5 278 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 EDC3Q96F86 508 aaKnown RBP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 NIP7Q9Y221 180 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 ATP1A1P05023 1023 aaKnown RBP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 PTPREP23469 700 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 XRCC4Q13426 336 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 HSP90AA4PQ58FG1 418 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 TRAPPC3LQ5T215 181 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 NLRP14Q86W24 1093 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 MREGQ8N565 214 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 MYCBPAPQ8TBZ2 947 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 ZNF483Q8TF39 744 aaPredicted RBP24.3■■□□□ 1.48
CLDND1-202ENST00000394180 TCP11Q8WWU5 503 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
CLDND1-202ENST00000394180 ANKRD18BA2A2Z9 1011 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 GOLGA8BA8MQT2 603 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 SH2B2O14492 632 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 ABL1P00519 1130 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 EN1Q05925 392 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 GLE1Q53GS7 698 aaKnown RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 CCDC114Q96M63 670 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 CCT8L2Q96SF2 557 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 KLF18A0A0U1RQI7 1052 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 SUSD4Q5VX71 490 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 CRELD2Q6UXH1 353 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 BICDL1Q6ZP65 573 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 ARFGAP2Q8N6H7 521 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 ZBTB38Q8NAP3 1195 aaPredicted RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 TATDN2Q93075 761 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 SLF1Q9BQI6 1058 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 TRMT112Q9UI30 125 aaKnown RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 GUCA1BQ9UMX6 200 aa24.29■■□□□ 1.48
CLDND1-202ENST00000394180 REXO2Q9Y3B8 237 aaKnown RBP24.29■■□□□ 1.48
CLDND1-202ENST00000394180 ZPR1O75312 459 aa24.28■■□□□ 1.48
CLDND1-202ENST00000394180 ZNF827Q17R98 1081 aa24.28■■□□□ 1.48
CLDND1-202ENST00000394180 RNF187Q5TA31 235 aaPredicted RBP24.28■■□□□ 1.48
CLDND1-202ENST00000394180 AP1ARQ63HQ0 302 aa24.28■■□□□ 1.48
CLDND1-202ENST00000394180 KRT40Q6A162 431 aa24.28■■□□□ 1.48
CLDND1-202ENST00000394180 BCORQ6W2J9 1755 aa24.28■■□□□ 1.48
CLDND1-202ENST00000394180 PES1O00541 588 aaKnown RBP24.27■■□□□ 1.48
CLDND1-202ENST00000394180 GHRP10912 638 aa24.27■■□□□ 1.48
CLDND1-202ENST00000394180 RFC4P35249 363 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms