RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 ZNF654Q8IZM8 581 aa12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 MLXIPQ9HAP2 919 aa12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 IQSEC3Q9UPP2 1182 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-202ENST00000381160 TARSL2A2RTX5 802 aaKnown RBP12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 HERVK_113P62684 666 aa12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 ANKLE2Q86XL3 938 aa12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 IFNL3Q8IZI9 196 aa12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 CRACR2BQ8N4Y2 399 aaPredicted RBP12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 MMRN2Q9H8L6 949 aa12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 RMND1Q9NWS8 449 aa12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.42
NPC1L1-202ENST00000381160 PSMA7O14818 248 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 BUB1O43683 1085 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 CPP00450 1065 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 PBX1P40424 430 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 PRCPP42785 496 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 SATB1Q01826 763 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 CSGALNACT2Q8N6G5 542 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 MB21D1Q8N884 522 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 RWDD2AQ9UIY3 292 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 TBX22Q9Y458 520 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 NCK2O43639 380 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 RPN1P04843 607 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 KLK7P49862 253 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 PPP2R5AQ15172 486 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 FAM207AQ9NSI2 230 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 DONSONQ9NYP3 566 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 NFU1Q9UMS0 254 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 SEMA3EO15041 775 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 PHKG2P15735 406 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 EPHB4P54760 987 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 CHRNA2Q15822 529 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 LIMA1Q9UHB6 759 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-202ENST00000381160 ITIH6Q6UXX5 1313 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 BACH1O14867 736 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 ORAI2Q96SN7 254 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 PHKA1P46020 1223 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 NOC4LQ9BVI4 516 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 ODF2LQ9ULJ1 636 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 RPSAP08865 295 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 CALRP27797 417 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 SYNE4Q8N205 404 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 SPATA4Q8NEY3 305 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 SLIT1O75093 1534 aa12.44□□□□□ -0.42
NPC1L1-202ENST00000381160 RCCD1A6NED2 376 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 NEBLO76041 1014 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 UBA7P41226 1012 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 NEDD9Q14511 834 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 NAA25Q14CX7 972 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 PTPROQ16827 1216 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 SLC4A8Q2Y0W8 1093 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 TSEN2Q8NCE0 465 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 TRIM58Q8NG06 486 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 EPB41L5Q9HCM4 733 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 STIM2Q9P246 746 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 SCP2P22307 547 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 LIFRP42702 1097 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 CASP7P55210 303 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 CCDC40Q4G0X9 1142 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 CACNA2D4Q7Z3S7 1137 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 SGMS1Q86VZ5 419 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 ZIM3Q96PE6 472 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 TUBGCP2Q9BSJ2 902 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 WDR19Q8NEZ3 1342 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 H7C1D1 291 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 NR1D1P20393 614 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 CLNS1AP54105 237 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 TCIRG1Q13488 830 aa12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-202ENST00000381160 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms