RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CXCL11O14625 94 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 KIF3CO14782 793 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 PPIL2Q13356 520 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 SH3D19Q5HYK7 790 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 HOMER1Q86YM7 354 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
TSSC4-203ENST00000380996 OTUD5Q96G74 571 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 PIGSQ96S52 555 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 JMJD4Q9H9V9 463 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 ZDHHC9Q9Y397 364 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 PAPPA2Q9BXP8 1791 aa23.6■■□□□ 1.37
TSSC4-203ENST00000380996 PNMA6FA0A0J9YX94 578 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 hCG_1984214I3L0E3 225 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 HMGCS2P54868 508 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 ZNF713Q8N859 430 aaPredicted RBP23.59■■□□□ 1.37
TSSC4-203ENST00000380996 SMC1BQ8NDV3 1235 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 SH3GLB2Q9NR46 395 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 VCAM1P19320 739 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 GUCY1B3Q02153 619 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 KRT40Q6A162 431 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 OPTNQ96CV9 577 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 MTMR8Q96EF0 704 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 ATP6V1DQ9Y5K8 247 aa23.59■■□□□ 1.37
TSSC4-203ENST00000380996 ZBTB5O15062 677 aa23.58■■□□□ 1.36
TSSC4-203ENST00000380996 F13A1P00488 732 aa23.58■■□□□ 1.36
TSSC4-203ENST00000380996 SAFBQ15424 915 aaKnown RBP eCLIP23.58■■□□□ 1.36
TSSC4-203ENST00000380996 FOXD4L5Q5VV16 416 aaPredicted RBP23.58■■□□□ 1.36
TSSC4-203ENST00000380996 CCDC12Q8WUD4 166 aaPredicted RBP23.58■■□□□ 1.36
TSSC4-203ENST00000380996 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.36
TSSC4-203ENST00000380996 FOXD4L4Q8WXT5 416 aaPredicted RBP23.58■■□□□ 1.36
TSSC4-203ENST00000380996 IRF6O14896 467 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 CST9Q5W186 159 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 OTUD7BQ6GQQ9 843 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 HEATR3Q7Z4Q2 680 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 CCDC148Q8NFR7 591 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 TANGO6Q9C0B7 1094 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 ZSCAN16Q9H4T2 348 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-203ENST00000380996 RPAP3Q9H6T3 665 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-203ENST00000380996 BARHL2Q9NY43 387 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 VPS54Q9P1Q0 977 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 PRR12Q9ULL5 1215 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 KCNH4Q9UQ05 1017 aa23.57■■□□□ 1.36
TSSC4-203ENST00000380996 MCTP1Q6DN14 999 aa23.56■■□□□ 1.36
TSSC4-203ENST00000380996 PRPF38AQ8NAV1 312 aaKnown RBP23.56■■□□□ 1.36
TSSC4-203ENST00000380996 TNPO1Q92973 898 aaKnown RBP23.56■■□□□ 1.36
TSSC4-203ENST00000380996 GJB4Q9NTQ9 266 aa23.56■■□□□ 1.36
TSSC4-203ENST00000380996 OTOFQ9HC10 1997 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 MMP1P03956 469 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 TRAF1Q13077 416 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 CDC37Q16543 378 aaPredicted RBP23.55■■□□□ 1.36
TSSC4-203ENST00000380996 WWC2Q6AWC2 1192 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 PROCA1Q8NCQ7 364 aaPredicted RBP23.55■■□□□ 1.36
TSSC4-203ENST00000380996 KIFC2Q96AC6 838 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 SLF1Q9BQI6 1058 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 BRMS1Q9HCU9 246 aa23.55■■□□□ 1.36
TSSC4-203ENST00000380996 A0A0G2JLL6 359 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-203ENST00000380996 TOMM70O94826 608 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 CALML3P27482 149 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 NLRP5P59047 1200 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 DGKZQ13574 1117 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 PRRT2Q7Z6L0 340 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-203ENST00000380996 GPKOWQ92917 476 aaPredicted RBP eCLIP23.54■■□□□ 1.36
TSSC4-203ENST00000380996 PHF20Q9BVI0 1012 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 STXBP3O00186 592 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 FLOT1O75955 427 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 GNL2Q13823 731 aaKnown RBP23.54■■□□□ 1.36
TSSC4-203ENST00000380996 QRICH1Q2TAL8 776 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 GALNT17Q6IS24 598 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 FERMT3Q86UX7 667 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 KCNJ14Q9UNX9 436 aa23.54■■□□□ 1.36
TSSC4-203ENST00000380996 PASKQ96RG2 1323 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 PHIPQ8WWQ0 1821 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 FDX1P10109 184 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 NAPAP54920 295 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 HUNKP57058 714 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 SNAPC2Q13487 334 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 FASTKD5Q7L8L6 764 aaKnown RBP23.53■■□□□ 1.36
TSSC4-203ENST00000380996 FBXO28Q9NVF7 368 aa23.53■■□□□ 1.36
TSSC4-203ENST00000380996 PPP1R18Q6NYC8 613 aa23.52■■□□□ 1.36
TSSC4-203ENST00000380996 AMNQ9BXJ7 453 aa23.52■■□□□ 1.36
TSSC4-203ENST00000380996 RANBP17Q9H2T7 1088 aaKnown RBP23.52■■□□□ 1.36
TSSC4-203ENST00000380996 PPP1R9AQ9ULJ8 1098 aa23.52■■□□□ 1.36
TSSC4-203ENST00000380996 BAZ2BQ9UIF8 2168 aaKnown RBP23.52■■□□□ 1.35
TSSC4-203ENST00000380996 KIF23Q02241 960 aaPredicted RBP23.51■■□□□ 1.35
TSSC4-203ENST00000380996 RESTQ13127 1097 aa23.51■■□□□ 1.35
TSSC4-203ENST00000380996 COG2Q14746 738 aa23.51■■□□□ 1.35
TSSC4-203ENST00000380996 SAMD1Q6SPF0 538 aaPredicted RBP23.51■■□□□ 1.35
TSSC4-203ENST00000380996 GADL1Q6ZQY3 521 aa23.51■■□□□ 1.35
TSSC4-203ENST00000380996 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
TSSC4-203ENST00000380996 BRAPQ7Z569 592 aa23.51■■□□□ 1.35
TSSC4-203ENST00000380996 FBXO11Q86XK2 927 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms