RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SMARCAL1Q9NZC9 954 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RFX7Q2KHR2 1363 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 LOC102724428A0A0B4J2F2 783 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ZNF185O15231 689 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SIK1P57059 783 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RNF187Q5TA31 235 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 FBXO3Q9UK99 471 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TRAF5O00463 557 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TBC1D8O95759 1140 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ATP1A2P50993 1020 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CABP7Q86V35 215 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TRIML1Q8N9V2 468 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.173e-7■■■■■ 247.9
TNFRSF1B-201ENST00000376259 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ACTN4O43707 911 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KLRK1P26718 216 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KLK7P49862 253 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KRT83P78385 493 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CASP8Q14790 479 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PNKPQ96T60 521 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TUBGCP2Q9BSJ2 902 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 GNPATO15228 680 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RASGRP2Q7LDG7 609 aa16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SRP68Q9UHB9 627 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KCNQ2O43526 872 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TACC1O75410 805 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 NDUFA10O95299 355 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 GYPCP04921 128 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.17
TNFRSF1B-201ENST00000376259 GUCY2FP51841 1108 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 MECOMQ03112 1051 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NR1I3Q14994 352 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RASSF4Q9H2L5 321 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GTPBP6O43824 516 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 HPDP32754 393 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 IRX5P78411 483 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 BRD3Q15059 726 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 LRRC47Q8N1G4 583 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOLGB1Q14789 3259 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 BAG3O95817 575 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 KLHL7Q8IXQ5 586 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 IFIH1Q9BYX4 1025 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 AGPAT5Q9NUQ2 364 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 DUSP10Q9Y6W6 482 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 MAGEA1P43355 309 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TAF4BQ92750 862 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ADD3Q9UEY8 706 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
TNFRSF1B-201ENST00000376259 AFAP1L1Q8TED9 768 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GJA10Q969M2 543 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 HSD3B7Q9H2F3 369 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SMIM23A6NLE4 172 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 H3BQF6 201 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ATP1A1P05023 1023 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TRIM31Q9BZY9 425 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CCDC113Q9H0I3 377 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 FCER1AP12319 257 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 AMPD3Q01432 767 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 IQCEQ6IPM2 695 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
TNFRSF1B-201ENST00000376259 A0A1B0GTH6 734 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 RNF40O75150 1001 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 DPYDQ12882 1025 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TEX11Q8IYF3 940 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 COA7Q96BR5 231 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 MOCS3O95396 460 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PLCG1P19174 1290 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PLS1Q14651 629 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TAX1BP1Q86VP1 789 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TSG101Q99816 390 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 NAA15Q9BXJ9 866 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
TNFRSF1B-201ENST00000376259 CYP2C19P33261 490 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms