RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 TUBA4AP68366 448 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 FAM209AQ5JX71 171 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 INTS3Q68E01 1043 aaKnown RBP5.51□□□□□ -1.53
RC3H1-202ENST00000367694 TMEM53Q6P2H8 277 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 SARM1Q6SZW1 724 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 HOOK3Q86VS8 718 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 HS6ST3Q8IZP7 471 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 MSANTD4Q8NCY6 345 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 UPF1Q92900 1129 aaKnown RBP eCLIP5.51□□□□□ -1.53
RC3H1-202ENST00000367694 CTAGE1Q96RT6 745 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 ZNF777Q9ULD5 760 aaPredicted RBP5.51□□□□□ -1.53
RC3H1-202ENST00000367694 TRAF3IP3Q9Y228 551 aa5.51□□□□□ -1.53
RC3H1-202ENST00000367694 FBXO21O94952 628 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 VIMP08670 466 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 SLC8A1P32418 973 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 GPSM2P81274 684 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 SAFBQ15424 915 aaKnown RBP eCLIP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NFE2L2Q16236 605 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NANOGNBQ7Z5D8 188 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 CABP7Q86V35 215 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NLGN1Q8N2Q7 840 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 PAWRQ96IZ0 340 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 EIF2AQ9BY44 585 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 CNNM2Q9H8M5 875 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 POLMQ9NP87 494 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 KLC4Q9NSK0 619 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 WDR70Q9NW82 654 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 GALNT8Q9NY28 637 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 KIAA1257Q9ULG3 409 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 SH3GLB1Q9Y371 365 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 MSH6P52701 1360 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NDUFB5O43674 189 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 POLD2P49005 469 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 LBRQ14739 615 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 MYLK3Q32MK0 819 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 FAM171BQ6P995 826 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 MCM10Q7L590 875 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 DZIP1Q86YF9 867 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 CEP112Q8N8E3 955 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NUP133Q8WUM0 1156 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 ATRIPQ8WXE1 791 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NELL1Q92832 810 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 FUCA2Q9BTY2 467 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 ZNHIT6Q9NWK9 470 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 CFDP1Q9UEE9 299 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 AGO2Q9UKV8 859 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 PPP2R3BQ9Y5P8 575 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 BTBD11A6QL63 1104 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 FOXN3O00409 490 aaPredicted RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 GLI1P08151 1106 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 PTPN2P17706 415 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 GNAT2P19087 354 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 AMPD3Q01432 767 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 NUCB1Q02818 461 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 MAP7Q14244 749 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 ACAP1Q15027 740 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 CCDC153Q494R4 210 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 PPP1R15BQ5SWA1 713 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 POTEEQ6S8J3 1075 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 POTEAQ6S8J7 498 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 DGLUCYQ7Z3D6 616 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 USP38Q8NB14 1042 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 HELQQ8TDG4 1101 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 WHAMMQ8TF30 809 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 EPSTI1Q96J88 318 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 COG3Q96JB2 828 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 DCTPP1Q9H773 170 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 PLEKHA5Q9HAU0 1116 aa5.5□□□□□ -1.53
RC3H1-202ENST00000367694 HERC5Q9UII4 1024 aaKnown RBP5.5□□□□□ -1.53
RC3H1-202ENST00000367694 ST20-MTHFSA0A0A6YYL1 179 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 SRGNP10124 158 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 GNAT1P11488 350 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 USP5P45974 858 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 LMAN1P49257 510 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 DMPKQ09013 629 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 ZNF772Q68DY9 489 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 ALKBH2Q6NS38 261 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 SLC2A7Q6PXP3 512 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 INTS8Q75QN2 995 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 CHPFQ8IZ52 775 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 TRMT2AQ8IZ69 625 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 SYCP3Q8IZU3 236 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 ABTB2Q8N961 1025 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 HNRNPABQ99729 332 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 NAP1L4Q99733 375 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 UQCC2Q9BRT2 126 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 VCPKMTQ9H867 229 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 TTC7AQ9ULT0 858 aaPredicted RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 FAM169AQ9Y6X4 670 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 KIF24Q5T7B8 1368 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 CD2BP2O95400 341 aaKnown RBP5.49□□□□□ -1.53
RC3H1-202ENST00000367694 RXRAP19793 462 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 KRT9P35527 623 aa5.49□□□□□ -1.53
RC3H1-202ENST00000367694 SLC16A2P36021 539 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms