RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
PARP1-203ENST00000366794 CFBP00751 764 aa15.89■□□□□ 0.13
PARP1-203ENST00000366794 SPATA1Q5VX52 437 aa15.89■□□□□ 0.13
PARP1-203ENST00000366794 SORBS3O60504 671 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 RAPGEF1Q13905 1077 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 TMEM47Q9BQJ4 181 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 SPDYE3A6NKU9 549 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
PARP1-203ENST00000366794 PLCG2P16885 1265 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 HLTFQ14527 1009 aaKnown RBP eCLIP15.88■□□□□ 0.13
PARP1-203ENST00000366794 CCDC174Q6PII3 467 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 CUL5Q93034 780 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 USP17L5A8MUK1 530 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 CDK8P49336 464 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 ADCY7P51828 1080 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 VSTM4Q8IW00 320 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 GOLGA1Q92805 767 aa15.88■□□□□ 0.13
PARP1-203ENST00000366794 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 KIF5AQ12840 1032 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 FBXO38Q6PIJ6 1188 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 ACBD3Q9H3P7 528 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 SPATA31A1Q5TZJ5 1347 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 CAMTA1Q9Y6Y1 1673 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 MEIS1O00470 390 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 CYLC1P35663 651 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 TOB1P50616 345 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 PRKG1Q13976 671 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 C2CD5Q86YS7 1000 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 FOXP4Q8IVH2 680 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 SYCP3Q8IZU3 236 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 FAM107BQ9H098 131 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 FBXO2Q9UK22 296 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 TFR2Q9UP52 801 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 POTEMA6NI47 508 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 CCZ1BP86790 482 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 CCZ1P86791 482 aaPredicted RBP15.87■□□□□ 0.13
PARP1-203ENST00000366794 SYCP1Q15431 976 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
PARP1-203ENST00000366794 XDHP47989 1333 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 TCP10L2B9ZVM9 353 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 SLC35F6Q8N357 371 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 ST7Q9NRC1 585 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 SPTLC3Q9NUV7 552 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 OR52Z1P0C646 297 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 PLCG1P19174 1290 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 COPB1P53618 953 aaKnown RBP15.86■□□□□ 0.13
PARP1-203ENST00000366794 RRAGAQ7L523 313 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 CEP95Q96GE4 821 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 VPS18Q9P253 973 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 IKBKBO14920 756 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
PARP1-203ENST00000366794 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
PARP1-203ENST00000366794 GYS2P54840 703 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 PRR16Q569H4 304 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 LEKR1Q6ZMV7 388 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 TAF4BQ92750 862 aa15.86■□□□□ 0.13
PARP1-203ENST00000366794 BCCIPQ9P287 314 aaKnown RBP eCLIP15.86■□□□□ 0.13
PARP1-203ENST00000366794 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
PARP1-203ENST00000366794 TBCAO75347 108 aaKnown RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 DDAH1O94760 285 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 TMEM132AQ24JP5 1023 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 NEK8Q86SG6 692 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 FAM217BQ9NTX9 383 aaPredicted RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.13
PARP1-203ENST00000366794 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 CD209Q9NNX6 404 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 RFX7Q2KHR2 1363 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 FOXP2O15409 715 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 PAFAH1B1P43034 410 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 MRPL12P52815 198 aaKnown RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 GPSM2P81274 684 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 NTRK3Q16288 839 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 SARM1Q6SZW1 724 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 KRT31Q15323 416 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 ALX1Q15699 326 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 SMCR8Q8TEV9 937 aaPredicted RBP15.85■□□□□ 0.13
PARP1-203ENST00000366794 OGFRQ9NZT2 677 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 PCDHA4Q9UN74 947 aa15.85■□□□□ 0.13
PARP1-203ENST00000366794 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
PARP1-203ENST00000366794 PPP2R5BQ15173 497 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 CLEC4GQ6UXB4 293 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 KRT25Q7Z3Z0 450 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 NEK11Q8NG66 645 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 WDR24Q96S15 920 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L15C9J2P7 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L13C9JLJ4 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L11C9JVI0 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L18D6R9N7 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L22D6RA61 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L17D6RBQ6 530 aa15.84■□□□□ 0.13
PARP1-203ENST00000366794 USP17L19D6RCP7 530 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms