RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ARHGEF39Q8N4T4 335 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SCLYQ96I15 445 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SCYL1Q96KG9 808 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ARPC5LQ9BPX5 153 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 WDR18Q9BV38 432 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GNL3LQ9NVN8 582 aaKnown RBP4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PNMA8BQ9ULN7 279 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ZNF451Q9Y4E5 1061 aa4.77□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ELOA3CA0A087WX78 387 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ELOA3DA6NLF2 546 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SOBPA7XYQ1 873 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 C2CD2LO14523 706 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 AXIN1O15169 862 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PRPF3O43395 683 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SNUPNO95149 360 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CPP00450 1065 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 F2P00734 622 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 IFIT2P09913 472 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ALAS2P22557 587 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CCND1P24385 295 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CAP2P40123 477 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 INSM1Q01101 510 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ID3Q02535 119 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SETDB1Q15047 1291 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GRIK5Q16478 980 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PTPN21Q16825 1174 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ELOA3BQ3SY89 546 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ZFYVE27Q5T4F4 411 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PIK3R6Q5UE93 754 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 IQSEC1Q6DN90 963 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ZCCHC8Q6NZY4 707 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CDC37L1Q7L3B6 337 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 DDX53Q86TM3 631 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 C7orf61Q8IZ16 206 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 RNF214Q8ND24 703 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ELOA3Q8NG57 546 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 BAHD1Q8TBE0 780 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 COG1Q8WTW3 980 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PPM1EQ8WY54 764 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 MDFIQ99750 246 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SLC13A1Q9BZW2 595 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 MKRN2Q9H000 416 aaKnown RBP4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 TERF2IPQ9NYB0 399 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 IP6K2Q9UHH9 426 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ANKRD6Q9Y2G4 727 aa4.76□□□□□ -1.65
RNU6-1249P-201ENST00000363237 VSTM5A8MXK1 200 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 TBX1O43435 398 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 WIPF1O43516 503 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ULK1O75385 1050 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 WDHD1O75717 1129 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 NBPF7P0C2Y1 421 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PHKG2P15735 406 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 BAG6P46379 1132 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 ID4P47928 161 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GFRA1P56159 465 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 RNF4P78317 190 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PICALMQ13492 652 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 AUHQ13825 339 aaKnown RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 EXOSC6Q5RKV6 272 aaKnown RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SPTY2D1Q68D10 685 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 TXNDC11Q6PKC3 985 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 IFNL3Q8IZI9 196 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CRIPAKQ8N1N5 446 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 NUDT8Q8WV74 236 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 UBE2Q2Q8WVN8 375 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 BTN2A2Q8WVV5 523 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 KLHDC7BQ96G42 594 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SARGQ9BW04 601 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 LGR4Q9BXB1 951 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 USP26Q9BXU7 913 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GP6Q9HCN6 339 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 BCCIPQ9P287 314 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 KLF15Q9UIH9 416 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 RCAN3Q9UKA8 241 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PDZRN3Q9UPQ7 1066 aa4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 DIS3Q9Y2L1 958 aaKnown RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 LUC7L2Q9Y383 392 aaKnown RBP4.75□□□□□ -1.65
RNU6-1249P-201ENST00000363237 LOC100289279A0A1B0GTE1 492 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GPR25O00155 361 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 TMPRSS2O15393 492 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 DGAT1O75907 488 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 PRKD3O94806 890 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 KCNH1O95259 989 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CRTAMO95727 393 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CST3P01034 146 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 SCG5P05408 212 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 VCAM1P19320 739 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 CYP2C19P33261 490 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 KCNJ6P48051 423 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 AFF1P51825 1210 aaKnown RBP4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 IL2P60568 153 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 OCRLQ01968 901 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 TCIRG1Q13488 830 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 GTF2H3Q13889 308 aa4.74□□□□□ -1.65
RNU6-1249P-201ENST00000363237 NTRK3Q16288 839 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms