RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 ZBTB48P10074 688 aaPredicted RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 DDIT3P35638 169 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 SLC1A4P43007 532 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 ZYXQ15942 572 aaKnown RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 NBPF11Q86T75 865 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 CMTR1Q8N1G2 835 aaKnown RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 CCDC82Q8N4S0 544 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 SRBD1Q8N5C6 995 aaKnown RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 ZNF280CQ8ND82 737 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 PHKBQ93100 1093 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 SLC26A6Q9BXS9 759 aa23.93■■□□□ 1.42
SHISA4-201ENST00000362011 RNF26Q9BY78 433 aaPredicted RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 ISY1Q9ULR0 285 aaKnown RBP23.93■■□□□ 1.42
SHISA4-201ENST00000362011 USP17L10C9JJH3 530 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 USP14P54578 494 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 AKAP17AQ02040 695 aaKnown RBP23.92■■□□□ 1.42
SHISA4-201ENST00000362011 FUT2Q10981 343 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 IFNL1Q8IU54 200 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 GPCPD1Q9NPB8 672 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 CIZ1Q9ULV3 898 aaPredicted RBP23.92■■□□□ 1.42
SHISA4-201ENST00000362011 ZHX2Q9Y6X8 837 aa23.92■■□□□ 1.42
SHISA4-201ENST00000362011 COL11A1P12107 1806 aaPredicted RBP23.91■■□□□ 1.42
SHISA4-201ENST00000362011 PPFIA3O75145 1194 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 BMP3P12645 472 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 FDPSP14324 419 aaKnown RBP23.91■■□□□ 1.42
SHISA4-201ENST00000362011 SMARCA1P28370 1054 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 SPP2Q13103 211 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 SPZ1Q9BXG8 430 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 ELP3Q9H9T3 547 aa23.91■■□□□ 1.42
SHISA4-201ENST00000362011 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.91■■□□□ 1.42
SHISA4-201ENST00000362011 PRPF3O43395 683 aaKnown RBP23.9■■□□□ 1.42
SHISA4-201ENST00000362011 PDCP20941 246 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 MTMR2Q13614 643 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 KCTD1Q719H9 257 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 ERO1BQ86YB8 467 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 WASF1Q92558 559 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 LPAR1Q92633 364 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 SLC10A4Q96EP9 437 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 WNK4Q96J92 1243 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 CLMNQ96JQ2 1002 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 CHMP5Q9NZZ3 219 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 RBM27Q9P2N5 1060 aaKnown RBP23.9■■□□□ 1.42
SHISA4-201ENST00000362011 AFG3L2Q9Y4W6 797 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 RLFQ13129 1914 aa23.9■■□□□ 1.42
SHISA4-201ENST00000362011 C19orf81C9J6K1 198 aa23.89■■□□□ 1.42
SHISA4-201ENST00000362011 DEXIO95424 95 aa23.89■■□□□ 1.42
SHISA4-201ENST00000362011 BACE1P56817 501 aa23.89■■□□□ 1.42
SHISA4-201ENST00000362011 KIAA1755Q5JYT7 1200 aa23.89■■□□□ 1.42
SHISA4-201ENST00000362011 SPICE1Q8N0Z3 855 aa23.89■■□□□ 1.42
SHISA4-201ENST00000362011 NUP88Q99567 741 aaPredicted RBP23.89■■□□□ 1.42
SHISA4-201ENST00000362011 SPDYE5A6NIY4 337 aa23.88■■□□□ 1.41
SHISA4-201ENST00000362011 TRIM75PA6NK02 468 aa23.88■■□□□ 1.41
SHISA4-201ENST00000362011 IGF2BP3O00425 579 aaKnown RBP eCLIP23.88■■□□□ 1.41
SHISA4-201ENST00000362011 PPATQ06203 517 aa23.88■■□□□ 1.41
SHISA4-201ENST00000362011 LARP1BQ659C4 914 aaKnown RBP23.88■■□□□ 1.41
SHISA4-201ENST00000362011 UBA5Q9GZZ9 404 aa23.88■■□□□ 1.41
SHISA4-201ENST00000362011 HTTP42858 3142 aa23.88■■□□□ 1.41
SHISA4-201ENST00000362011 TCHHQ07283 1943 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 WDR46O15213 610 aaKnown RBP23.87■■□□□ 1.41
SHISA4-201ENST00000362011 CYTH3O43739 400 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 PDIA4P13667 645 aaKnown RBP23.87■■□□□ 1.41
SHISA4-201ENST00000362011 FAM83BQ5T0W9 1011 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 TTBK2Q6IQ55 1244 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 ALG1Q9BT22 464 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 CPVLQ9H3G5 476 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 RIOX1Q9H6W3 641 aa23.87■■□□□ 1.41
SHISA4-201ENST00000362011 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
SHISA4-201ENST00000362011 SYT1P21579 422 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 NUCB2P80303 420 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 SLC35G1Q2M3R5 365 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 CNKSR2Q8WXI2 1034 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 OTUD5Q96G74 571 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 C12orf42Q96LP6 360 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 EMILIN3Q9NT22 766 aa23.86■■□□□ 1.41
SHISA4-201ENST00000362011 TESPA1A2RU30 521 aaPredicted RBP23.85■■□□□ 1.41
SHISA4-201ENST00000362011 TMEM232C9JQI7 657 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 GJA5P36382 358 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 IKQ13123 557 aaPredicted RBP23.85■■□□□ 1.41
SHISA4-201ENST00000362011 PPIL2Q13356 520 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 SH3D19Q5HYK7 790 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 BTNL9Q6UXG8 535 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 OTOP1Q7RTM1 612 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 RRP36Q96EU6 259 aaKnown RBP23.85■■□□□ 1.41
SHISA4-201ENST00000362011 TMOD4Q9NZQ9 345 aa23.85■■□□□ 1.41
SHISA4-201ENST00000362011 STX6O43752 255 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 SLC16A2P36021 539 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 STAT2P52630 851 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 FOSBP53539 338 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 HMGCS2P54868 508 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 FAM160B2Q86V87 743 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 ADGRF4Q8IZF3 695 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 CHURC1Q8WUH1 139 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 PIBF1Q8WXW3 757 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 OPTNQ96CV9 577 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 C8orf76Q96K31 380 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 VAT1LQ9HCJ6 419 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 FEM1BQ9UK73 627 aa23.84■■□□□ 1.41
SHISA4-201ENST00000362011 RBBP6Q7Z6E9 1792 aaKnown RBP23.84■■□□□ 1.41
SHISA4-201ENST00000362011 hCG_1642624A0A1W2PR95 340 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms