RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RGL2O15211 777 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 FOSL1P15407 271 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 ATP6V1C1P21283 382 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 TUBA1BP68363 451 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 GSTM4Q03013 218 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SAFB2Q14151 953 aaKnown RBP eCLIP9.51□□□□□ -0.89
TDP1-201ENST00000335725 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 TTC39CQ8N584 583 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 IFT81Q8WYA0 676 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 HAUS1Q96CS2 278 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 CGREF1Q99674 301 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 PALD1Q9ULE6 856 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SSX2IPQ9Y2D8 614 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 MYPNQ86TC9 1320 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SERPINC1P01008 464 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 HSPA8P11142 646 aaKnown RBP9.51□□□□□ -0.89
TDP1-201ENST00000335725 NR1D1P20393 614 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 KRT9P35527 623 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 NNTQ13423 1086 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 IRGCQ6NXR0 463 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 CCT7Q99832 543 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 SYT15Q9BQS2 421 aa9.51□□□□□ -0.89
TDP1-201ENST00000335725 FANCD2Q9BXW9 1451 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 SH3BP5O60239 455 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 MRPS25P82663 173 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 VSTM4Q8IW00 320 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 C1orf131Q8NDD1 294 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 CCT6BQ92526 530 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 RNPC3Q96LT9 517 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 DRC3Q9H069 523 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 MKS1Q9NXB0 559 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 DLGAP2Q9P1A6 1054 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 HESX1Q9UBX0 185 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 STK24Q9Y6E0 443 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 LAMC1P11047 1609 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 IKBKBO14920 756 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 MAP3K12Q12852 859 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 SLC7A5P1Q8MH63 180 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 IRGQQ8WZA9 623 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 PTPRN2Q92932 1015 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 GFM2Q969S9 779 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 CCDC28BQ9BUN5 200 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 SLC7A5P2Q9GIP4 190 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 LARSQ9P2J5 1176 aaKnown RBP9.5□□□□□ -0.89
TDP1-201ENST00000335725 CHMP2BQ9UQN3 213 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 MAGI2Q86UL8 1455 aa9.5□□□□□ -0.89
TDP1-201ENST00000335725 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ATP2C2O75185 946 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 FUT4P22083 530 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ARHGEF6Q15052 776 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 IMMTQ16891 758 aaKnown RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 KANK3Q6NY19 840 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 RUFY4Q6ZNE9 571 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 NOA1Q8NC60 698 aaKnown RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 MPP4Q96JB8 637 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 JADE2Q9NQC1 790 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 TBCCD1Q9NVR7 557 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 IQSEC2Q5JU85 1478 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 GUCY1A3Q02108 690 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 P3H1Q32P28 736 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 C11orf74Q86VG3 221 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 VPS37AQ8NEZ2 397 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 LINS1Q8NG48 757 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.49□□□□□ -0.89
TDP1-201ENST00000335725 NCSTNQ92542 709 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 C8orf76Q96K31 380 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ZMAT5Q9UDW3 170 aaKnown RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 STAM2O75886 525 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 TSPY4P0CV99 314 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 TSPY10P0CW01 314 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 ACADSP16219 412 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 PLOD1Q02809 727 aaPredicted RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 ZBTB17Q13105 803 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 EIF4A2Q14240 407 aaKnown RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 RNF220Q5VTB9 566 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 SND1Q7KZF4 910 aaKnown RBP eCLIP9.49□□□□□ -0.89
TDP1-201ENST00000335725 TMEM139Q8IV31 216 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 DQX1Q8TE96 717 aaKnown RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 RPS6KC1Q96S38 1066 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 RPAP3Q9H6T3 665 aaPredicted RBP9.49□□□□□ -0.89
TDP1-201ENST00000335725 ZNF180Q9UJW8 692 aa9.49□□□□□ -0.89
TDP1-201ENST00000335725 C5orf60A6NFR6 353 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 CCT8L1PA6NM43 557 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 WFS1O76024 890 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms