RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 LHX8Q68G74 356 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 FAM160B2Q86V87 743 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 NBPF3Q9H094 633 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 RNF41Q9H4P4 317 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 SLC38A10Q9HBR0 1119 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 TCP11L1Q9NUJ3 509 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 DIS3Q9Y2L1 958 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 CTDP1Q9Y5B0 961 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 NR2E3Q9Y5X4 410 aa25.2■■□□□ 1.62
UBE2D3-201ENST00000321805 PLA2G6O60733 806 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 CYBAP13498 195 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 STAT2P52630 851 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 SNRNP48Q6IEG0 339 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 CWC27Q6UX04 472 aaKnown RBP25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 CHURC1Q8WUH1 139 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 STAG1Q8WVM7 1258 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 MAML3Q96JK9 1138 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 TACC3Q9Y6A5 838 aa25.19■■□□□ 1.62
UBE2D3-201ENST00000321805 CYP2C19P33261 490 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 SLC1A4P43007 532 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 MNX1P50219 401 aaPredicted RBP25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 IRX6P78412 446 aaPredicted RBP25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 AKNAD1Q5T1N1 836 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 DIS3LQ8TF46 1054 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 KIFC2Q96AC6 838 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 INCENPQ9NQS7 918 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 TOMM22Q9NS69 142 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 DDX20Q9UHI6 824 aaKnown RBP25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 NRBP1Q9UHY1 535 aa25.18■■□□□ 1.62
UBE2D3-201ENST00000321805 PDE4AP27815 886 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 TTC22Q5TAA0 569 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 MFSD6Q6ZSS7 791 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 DSCC1Q9BVC3 393 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 C11orf49Q9H6J7 331 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 PLXNA1Q9UIW2 1896 aa25.17■■□□□ 1.62
UBE2D3-201ENST00000321805 TMEM232C9JQI7 657 aa25.16■■□□□ 1.62
UBE2D3-201ENST00000321805 H0YGN5 161 aa25.16■■□□□ 1.62
UBE2D3-201ENST00000321805 NMT2O60551 498 aa25.16■■□□□ 1.62
UBE2D3-201ENST00000321805 FBXO40Q9UH90 709 aa25.16■■□□□ 1.62
UBE2D3-201ENST00000321805 RAD50Q92878 1312 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 ZNF213O14771 459 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 HAND2P61296 217 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 ZNF792Q3KQV3 632 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 RRP12Q5JTH9 1297 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 RCSD1Q6JBY9 416 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 MSL3Q8N5Y2 521 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 DCAF4Q8WV16 495 aa25.15■■□□□ 1.62
UBE2D3-201ENST00000321805 ALPK3Q96L96 1907 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 SEPT4O43236 478 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 EVI5O60447 810 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 TOP1P11387 765 aaKnown RBP25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 GSPT1P15170 499 aaKnown RBP25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 MCCP23508 829 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 CNGA1P29973 690 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 TBC1D10CQ8IV04 446 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 CPXCR1Q8N123 301 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 TRPV1Q8NER1 839 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 CHST13Q8NET6 341 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 TTC14Q96N46 770 aa25.14■■□□□ 1.62
UBE2D3-201ENST00000321805 COL6A1P12109 1028 aa25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 ESR2Q92731 530 aa25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 RAVER2Q9HCJ3 691 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 CTNNA3Q9UI47 895 aa25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 ISY1Q9ULR0 285 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 RIPK3Q9Y572 518 aa25.13■■□□□ 1.61
UBE2D3-201ENST00000321805 IKQ13123 557 aaPredicted RBP25.12■■□□□ 1.61
UBE2D3-201ENST00000321805 TINF2Q9BSI4 451 aa25.12■■□□□ 1.61
UBE2D3-201ENST00000321805 DNAJC25-GNG10A0A024R161 153 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 PGK2P07205 417 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 IMMTQ16891 758 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 TKFCQ3LXA3 575 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 CCDC178Q5BJE1 867 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 ZNF467Q7Z7K2 595 aaPredicted RBP25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 DDX11Q96FC9 970 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 TMEM47Q9BQJ4 181 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 PFASO15067 1338 aa25.11■■□□□ 1.61
UBE2D3-201ENST00000321805 DNM1LO00429 736 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 SLC34A2O95436 690 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 KCTD1Q719H9 257 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 RUFY2Q8WXA3 655 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 NEDD4P46934 1319 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 SYNGAP1Q96PV0 1343 aa25.1■■□□□ 1.61
UBE2D3-201ENST00000321805 HABP4Q5JVS0 413 aaKnown RBP25.09■■□□□ 1.61
UBE2D3-201ENST00000321805 BTNL9Q6UXG8 535 aa25.09■■□□□ 1.61
UBE2D3-201ENST00000321805 CCDC96Q2M329 555 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 MAMDC4Q6UXC1 1216 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 IQCA1Q86XH1 822 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 DGKHQ86XP1 1220 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 ANKRD35Q8N283 1001 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 ARRDC4Q8NCT1 418 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 ACAD9Q9H845 621 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 PRR12Q9ULL5 1215 aa25.08■■□□□ 1.61
UBE2D3-201ENST00000321805 ZNF536O15090 1300 aa25.08■■□□□ 1.6
UBE2D3-201ENST00000321805 CNPY2Q9Y2B0 182 aa25.07■■□□□ 1.6
UBE2D3-201ENST00000321805 PDHBP11177 359 aa25.06■■□□□ 1.6
UBE2D3-201ENST00000321805 SLC4A3P48751 1232 aa25.06■■□□□ 1.6
UBE2D3-201ENST00000321805 CNNM2Q9H8M5 875 aa25.06■■□□□ 1.6
UBE2D3-201ENST00000321805 PNMA2Q9UL42 364 aa25.06■■□□□ 1.6
UBE2D3-201ENST00000321805 COLQQ9Y215 455 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms