RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CALM2P0DP24 149 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 CALM3P0DP25 149 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS50-202ENST00000305866 TUBB4BP68371 445 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 TCP11X2Q5H9J9 407 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 RCSD1Q6JBY9 416 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 CCNI2Q6ZMN8 369 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 NUTM2AQ8IVF1 878 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 SMYD4Q8IYR2 804 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 C1orf131Q8NDD1 294 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 COG1Q8WTW3 980 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 SDF4Q9BRK5 362 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 PYM1Q9BRP8 204 aaKnown RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 DNAJC5Q9H3Z4 198 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 RNF41Q9H4P4 317 aaPredicted RBP6.17□□□□□ -1.42
VPS50-202ENST00000305866 CCDC87Q9NVE4 849 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 RWDD2AQ9UIY3 292 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 CAPN11Q9UMQ6 739 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
VPS50-202ENST00000305866 CCDC196A0A1B0GTZ2 297 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 A0A1W2PQC6 194 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 ZBTB43O43298 467 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 TPM4P67936 248 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 EZH2Q15910 746 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 CNPY4Q8N129 248 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 ADSSL1Q8N142 457 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 MMGT1Q8N4V1 131 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 PRPF38AQ8NAV1 312 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 RIN2Q8WYP3 895 aaPredicted RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 FERMT2Q96AC1 680 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 GSDMAQ96QA5 445 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 TSPYL1Q9H0U9 437 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 SIK3Q9Y2K2 1263 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 EPHB6O15197 1021 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 PRKAB2O43741 272 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 APPP05067 770 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 METTL24Q5JXM2 366 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 ARL6IP4Q66PJ3 421 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 HGSNATQ68CP4 663 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 HDXQ7Z353 690 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 ZC3H3Q8IXZ2 948 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 ANKRD31Q8N7Z5 1873 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 RRP36Q96EU6 259 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 NEUROD6Q96NK8 337 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 KCNMB3Q9NPA1 279 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 A1CFQ9NQ94 594 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 RSPH14Q9UHP6 348 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 DUSP10Q9Y6W6 482 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 PARP14Q460N5 1801 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 ZNF335Q9H4Z2 1342 aaPredicted RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 TTC26A0AVF1 554 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 WTIPA6NIX2 430 aaPredicted RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 SLC26A4O43511 780 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 CLSTN1O94985 981 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 CHADLQ6NUI6 762 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 DIS3L2Q8IYB7 885 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 IQCKQ8N0W5 287 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 LCORLQ8N3X6 602 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 SYMPKQ92797 1274 aaKnown RBP6.16□□□□□ -1.42
VPS50-202ENST00000305866 CAVIN3Q969G5 261 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 KBTBD4Q9NVX7 518 aa6.16□□□□□ -1.42
VPS50-202ENST00000305866 LOXHD1Q8IVV2 1947 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 BAZ2BQ9UIF8 2168 aaKnown RBP6.15□□□□□ -1.42
VPS50-202ENST00000305866 SYNRGQ9UMZ2 1314 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 LOC285556D6RIA3 1793 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 PJA2O43164 708 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 CCDC175P0C221 793 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 PRLRP16471 622 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 ATP2B1P20020 1258 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 TM4SF1P30408 202 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 MAP3K12Q12852 859 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 FIGNQ5HY92 759 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 IGSF22Q8N9C0 903 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 CNNM3Q8NE01 707 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 TXLNGYQ9BZA5 131 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 RASSF4Q9H2L5 321 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 KAT14Q9H8E8 782 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 MED4Q9NPJ6 270 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 ATP8B3O60423 1300 aa6.15□□□□□ -1.42
VPS50-202ENST00000305866 ZNF185O15231 689 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 PPFIA4O75335 1185 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 SRGNP10124 158 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 KLK7P49862 253 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 IRAK1P51617 712 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 PPP4CP60510 307 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 SSRP1Q08945 709 aaKnown RBP6.15□□□□□ -1.43
VPS50-202ENST00000305866 ZNF568Q3ZCX4 644 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 CCDC152Q4G0S7 254 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 HSP90AA4PQ58FG1 418 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 GALNT17Q6IS24 598 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 ARHGAP27Q6ZUM4 889 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 DZIP3Q86Y13 1208 aaKnown RBP6.15□□□□□ -1.43
VPS50-202ENST00000305866 CERS3Q8IU89 383 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 CD302Q8IX05 232 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 ENAHQ8N8S7 591 aaPredicted RBP6.15□□□□□ -1.43
VPS50-202ENST00000305866 FANCBQ8NB91 859 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 BAP1Q92560 729 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms