RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GALNT17Q6IS24 598 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 JMYQ8N9B5 988 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 NUP62CLQ9H1M0 184 aa26.22■■□□□ 1.79
PTX3-201ENST00000295927 A0A1W2PRG0 241 aa26.21■■□□□ 1.79
PTX3-201ENST00000295927 CAP2P40123 477 aa26.21■■□□□ 1.79
PTX3-201ENST00000295927 NAPAP54920 295 aa26.21■■□□□ 1.79
PTX3-201ENST00000295927 CCDC73Q6ZRK6 1079 aa26.21■■□□□ 1.79
PTX3-201ENST00000295927 DAGLBQ8NCG7 672 aa26.21■■□□□ 1.79
PTX3-201ENST00000295927 CCDC12Q8WUD4 166 aaPredicted RBP26.21■■□□□ 1.79
PTX3-201ENST00000295927 MRPS27Q92552 414 aaKnown RBP26.21■■□□□ 1.79
PTX3-201ENST00000295927 NOL7Q9UMY1 257 aaKnown RBP26.21■■□□□ 1.79
PTX3-201ENST00000295927 TRPM4Q8TD43 1214 aa26.2■■□□□ 1.79
PTX3-201ENST00000295927 SYNPO2Q9UMS6 1093 aa26.2■■□□□ 1.79
PTX3-201ENST00000295927 ATAD5Q96QE3 1844 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 M0R2N6 131 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 NDUFB10O96000 172 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 PIK3AP1Q6ZUJ8 805 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 GMCL1Q96IK5 515 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 ZMYND12Q9H0C1 365 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 DEFB129Q9H1M3 183 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 GRPEL1Q9HAV7 217 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 ARHGEF10LQ9HCE6 1279 aa26.2■■□□□ 1.78
PTX3-201ENST00000295927 TRIM75PA6NK02 468 aa26.19■■□□□ 1.78
PTX3-201ENST00000295927 hCG_1984214I3L0E3 225 aa26.19■■□□□ 1.78
PTX3-201ENST00000295927 SNW1Q13573 536 aaKnown RBP26.19■■□□□ 1.78
PTX3-201ENST00000295927 ZNF713Q8N859 430 aaPredicted RBP26.19■■□□□ 1.78
PTX3-201ENST00000295927 ENGASEQ8NFI3 743 aa26.19■■□□□ 1.78
PTX3-201ENST00000295927 CLSTN2Q9H4D0 955 aa26.19■■□□□ 1.78
PTX3-201ENST00000295927 RNF181Q9P0P0 153 aa26.19■■□□□ 1.78
PTX3-201ENST00000295927 FAM160A1Q05DH4 1040 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 CAMK4Q16566 473 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 CEP131Q9UPN4 1083 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 PNMA6FA0A0J9YX94 578 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 A0A1B0GVL5 298 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 USP17L10C9JJH3 530 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 ECE1P42892 770 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 MRE11P49959 708 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 RASGRP4Q8TDF6 673 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 ACER1Q8TDN7 264 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 MTMR8Q96EF0 704 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 PCDHA6Q9UN73 950 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 PCDHA8Q9Y5H6 950 aa26.18■■□□□ 1.78
PTX3-201ENST00000295927 SMCO2A6NFE2 343 aa26.17■■□□□ 1.78
PTX3-201ENST00000295927 PHF20L1A8MW92 1017 aa26.17■■□□□ 1.78
PTX3-201ENST00000295927 EPS15P42566 896 aa26.17■■□□□ 1.78
PTX3-201ENST00000295927 ANGEL2Q5VTE6 544 aaKnown RBP26.17■■□□□ 1.78
PTX3-201ENST00000295927 NUP88Q99567 741 aaPredicted RBP26.17■■□□□ 1.78
PTX3-201ENST00000295927 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.17■■□□□ 1.78
PTX3-201ENST00000295927 TMX2Q9Y320 296 aa26.17■■□□□ 1.78
PTX3-201ENST00000295927 WNT7AO00755 349 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 CMA1P23946 247 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 TTC38Q5R3I4 469 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 COA7Q96BR5 231 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 TNMDQ9H2S6 317 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 C6orf50Q9HD87 102 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 CUTAO60888 179 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 DDNO94850 711 aaPredicted RBP26.16■■□□□ 1.78
PTX3-201ENST00000295927 TRAPPC10P48553 1259 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 NDUFA8P51970 172 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 FMR1NBQ8N0W7 255 aaPredicted RBP26.16■■□□□ 1.78
PTX3-201ENST00000295927 KRI1Q8N9T8 703 aaKnown RBP26.16■■□□□ 1.78
PTX3-201ENST00000295927 CLIC6Q96NY7 704 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 TSPY26PQ9H489 355 aa26.16■■□□□ 1.78
PTX3-201ENST00000295927 ESYT2A0FGR8 921 aa26.15■■□□□ 1.78
PTX3-201ENST00000295927 ZBTB5O15062 677 aa26.15■■□□□ 1.78
PTX3-201ENST00000295927 PPP1R11O60927 126 aaPredicted RBP26.15■■□□□ 1.78
PTX3-201ENST00000295927 BMP3P12645 472 aa26.15■■□□□ 1.78
PTX3-201ENST00000295927 GNA11P29992 359 aa26.15■■□□□ 1.78
PTX3-201ENST00000295927 MAP3K11Q16584 847 aa26.15■■□□□ 1.78
PTX3-201ENST00000295927 APOBEC3FQ8IUX4 373 aaKnown RBP26.15■■□□□ 1.78
PTX3-201ENST00000295927 CCDC194A0A1B0GVG4 234 aa26.14■■□□□ 1.78
PTX3-201ENST00000295927 ASNSP08243 561 aa26.14■■□□□ 1.78
PTX3-201ENST00000295927 XRCC6P12956 609 aaKnown RBP eCLIP26.14■■□□□ 1.78
PTX3-201ENST00000295927 NBPF12Q5TAG4 269 aaPredicted RBP26.14■■□□□ 1.78
PTX3-201ENST00000295927 SHC4Q6S5L8 630 aa26.14■■□□□ 1.78
PTX3-201ENST00000295927 FBXO2Q9UK22 296 aaPredicted RBP26.14■■□□□ 1.78
PTX3-201ENST00000295927 PTPREP23469 700 aa26.14■■□□□ 1.77
PTX3-201ENST00000295927 HIRAP54198 1017 aaPredicted RBP26.14■■□□□ 1.77
PTX3-201ENST00000295927 ZNF174Q15697 407 aa26.14■■□□□ 1.77
PTX3-201ENST00000295927 RBSNQ9H1K0 784 aa26.14■■□□□ 1.77
PTX3-201ENST00000295927 MORC2Q9Y6X9 1032 aaPredicted RBP26.14■■□□□ 1.77
PTX3-201ENST00000295927 KINO60870 393 aaKnown RBP26.13■■□□□ 1.77
PTX3-201ENST00000295927 KIAA1755Q5JYT7 1200 aa26.13■■□□□ 1.77
PTX3-201ENST00000295927 SPICE1Q8N0Z3 855 aa26.13■■□□□ 1.77
PTX3-201ENST00000295927 GOPCQ9HD26 462 aa26.13■■□□□ 1.77
PTX3-201ENST00000295927 MRVI1Q9Y6F6 885 aa26.13■■□□□ 1.77
PTX3-201ENST00000295927 BMP15O95972 392 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 PFKFB1P16118 471 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 C9orf131Q5VYM1 1079 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 RESP18Q5W5W9 173 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 RBM43Q6ZSC3 357 aaKnown RBP26.12■■□□□ 1.77
PTX3-201ENST00000295927 GGA3Q9NZ52 723 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 SRPRBQ9Y5M8 271 aaKnown RBP26.12■■□□□ 1.77
PTX3-201ENST00000295927 TMEM232C9JQI7 657 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 PPP1R18Q6NYC8 613 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 FUCA2Q9BTY2 467 aa26.12■■□□□ 1.77
PTX3-201ENST00000295927 GRIN1Q05586 938 aa26.11■■□□□ 1.77
PTX3-201ENST00000295927 QRICH1Q2TAL8 776 aa26.11■■□□□ 1.77
PTX3-201ENST00000295927 CCDC84Q86UT8 332 aaPredicted RBP26.11■■□□□ 1.77
PTX3-201ENST00000295927 CKAP2LQ8IYA6 745 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms