RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 EMILIN3Q9NT22 766 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 PLA2G6O60733 806 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 VCAM1P19320 739 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 PKN1Q16512 942 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 FBXO18Q8NFZ0 1043 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 OPTNQ96CV9 577 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 C12orf42Q96LP6 360 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 AIFM3Q96NN9 605 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 JMJD4Q9H9V9 463 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 MTMR6Q9Y217 621 aa22.17■■□□□ 1.14
SBDS-201ENST00000246868 CXCL11O14625 94 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 ZSCAN22P10073 491 aaPredicted RBP22.16■■□□□ 1.14
SBDS-201ENST00000246868 YY1P25490 414 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 SH3D19Q5HYK7 790 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 PIGSQ96S52 555 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 TANGO6Q9C0B7 1094 aa22.16■■□□□ 1.14
SBDS-201ENST00000246868 PNMA6FA0A0J9YX94 578 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 hCG_1984214I3L0E3 225 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 IRF6O14896 467 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 GUCY1B3Q02153 619 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 FOXD4L5Q5VV16 416 aaPredicted RBP22.14■■□□□ 1.14
SBDS-201ENST00000246868 CST9Q5W186 159 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 KRT40Q6A162 431 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 HEATR3Q7Z4Q2 680 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 ZNF713Q8N859 430 aaPredicted RBP22.14■■□□□ 1.14
SBDS-201ENST00000246868 FOXD4L4Q8WXT5 416 aaPredicted RBP22.14■■□□□ 1.14
SBDS-201ENST00000246868 RPAP3Q9H6T3 665 aaPredicted RBP22.14■■□□□ 1.14
SBDS-201ENST00000246868 SH3GLB2Q9NR46 395 aa22.14■■□□□ 1.14
SBDS-201ENST00000246868 ZBTB5O15062 677 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 TOMM70O94826 608 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 SAFBQ15424 915 aaKnown RBP eCLIP22.13■■□□□ 1.13
SBDS-201ENST00000246868 FAM177A1Q8N128 213 aaPredicted RBP22.13■■□□□ 1.13
SBDS-201ENST00000246868 CCDC12Q8WUD4 166 aaPredicted RBP22.13■■□□□ 1.13
SBDS-201ENST00000246868 KIFC2Q96AC6 838 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 VPS54Q9P1Q0 977 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 PRR12Q9ULL5 1215 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 KCNH4Q9UQ05 1017 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 ZDHHC9Q9Y397 364 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 PTPRFP10586 1907 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 DGKZQ13574 1117 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 PRPF38AQ8NAV1 312 aaKnown RBP22.13■■□□□ 1.13
SBDS-201ENST00000246868 CCDC148Q8NFR7 591 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 MTMR8Q96EF0 704 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 SLF1Q9BQI6 1058 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 ATP6V1DQ9Y5K8 247 aa22.13■■□□□ 1.13
SBDS-201ENST00000246868 PASKQ96RG2 1323 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 A0A0G2JLL6 359 aaPredicted RBP22.12■■□□□ 1.13
SBDS-201ENST00000246868 FLOT1O75955 427 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 F13A1P00488 732 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 HUNKP57058 714 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 GNL2Q13823 731 aaKnown RBP22.12■■□□□ 1.13
SBDS-201ENST00000246868 CDC37Q16543 378 aaPredicted RBP22.12■■□□□ 1.13
SBDS-201ENST00000246868 OTUD7BQ6GQQ9 843 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
SBDS-201ENST00000246868 PRRT2Q7Z6L0 340 aaPredicted RBP22.12■■□□□ 1.13
SBDS-201ENST00000246868 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.13
SBDS-201ENST00000246868 BRMS1Q9HCU9 246 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 BARHL2Q9NY43 387 aa22.12■■□□□ 1.13
SBDS-201ENST00000246868 TRAF1Q13077 416 aa22.11■■□□□ 1.13
SBDS-201ENST00000246868 SNAPC2Q13487 334 aa22.11■■□□□ 1.13
SBDS-201ENST00000246868 WWC2Q6AWC2 1192 aa22.11■■□□□ 1.13
SBDS-201ENST00000246868 PROCA1Q8NCQ7 364 aaPredicted RBP22.11■■□□□ 1.13
SBDS-201ENST00000246868 ZSCAN16Q9H4T2 348 aaPredicted RBP22.11■■□□□ 1.13
SBDS-201ENST00000246868 GJB4Q9NTQ9 266 aa22.11■■□□□ 1.13
SBDS-201ENST00000246868 USP17L15C9J2P7 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L13C9JLJ4 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L11C9JVI0 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L18D6R9N7 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L22D6RA61 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L17D6RBQ6 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L19D6RCP7 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L20D6RJB6 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 MMP1P03956 469 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 CALML3P27482 149 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 USP17L24Q0WX57 530 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 QRICH1Q2TAL8 776 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 GADL1Q6ZQY3 521 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 FASTKD5Q7L8L6 764 aaKnown RBP22.1■■□□□ 1.13
SBDS-201ENST00000246868 WNK4Q96J92 1243 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
SBDS-201ENST00000246868 NAPAP54920 295 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 NLRP5P59047 1200 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 FERMT3Q86UX7 667 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 TNPO1Q92973 898 aaKnown RBP22.09■■□□□ 1.13
SBDS-201ENST00000246868 PPP1R9AQ9ULJ8 1098 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 KCNJ14Q9UNX9 436 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 CTDP1Q9Y5B0 961 aaPredicted RBP22.09■■□□□ 1.13
SBDS-201ENST00000246868 STXBP3O00186 592 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 FDX1P10109 184 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 PPP1R18Q6NYC8 613 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 PHF20Q9BVI0 1012 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 AMNQ9BXJ7 453 aa22.09■■□□□ 1.13
SBDS-201ENST00000246868 LOC285556D6RIA3 1793 aa22.08■■□□□ 1.13
SBDS-201ENST00000246868 FSTL1Q12841 308 aa22.08■■□□□ 1.13
SBDS-201ENST00000246868 GALNT17Q6IS24 598 aa22.08■■□□□ 1.13
SBDS-201ENST00000246868 CATSPERGQ6ZRH7 1159 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms