RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 LAMA4Q16363 1823 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 MOCS3O95396 460 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 SLC5A1P13866 664 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 NOP2P46087 812 aaKnown RBP18.76■□□□□ 0.59
CTDP1-201ENST00000075430 LRRC1Q9BTT6 524 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
CTDP1-201ENST00000075430 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 CRYBG1Q9Y4K1 1723 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 AKR1B10O60218 316 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 UBA7P41226 1012 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 USP14P54578 494 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 TDRD12Q587J7 1177 aaKnown RBP18.76■□□□□ 0.59
CTDP1-201ENST00000075430 ANKRD18AQ8IVF6 992 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 CHD2O14647 1828 aaKnown RBP18.76■□□□□ 0.59
CTDP1-201ENST00000075430 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
CTDP1-201ENST00000075430 KRT86O43790 486 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 RPN1P04843 607 aaKnown RBP18.75■□□□□ 0.59
CTDP1-201ENST00000075430 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
CTDP1-201ENST00000075430 CCDC70Q6NSX1 233 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 CSGALNACT2Q8N6G5 542 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 COG1Q8WTW3 980 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 RAB21Q9UL25 225 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 ERLIN2O94905 339 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 UBE3CQ15386 1083 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 C2CD5Q86YS7 1000 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 ZSCAN5CA6NGD5 496 aaPredicted RBP18.75■□□□□ 0.59
CTDP1-201ENST00000075430 NDUFAB1O14561 156 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 KIF5AQ12840 1032 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 SPA17Q15506 151 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 PPM1EQ8WY54 764 aa18.75■□□□□ 0.59
CTDP1-201ENST00000075430 MYH8P13535 1937 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 LIFRP42702 1097 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 ESR2Q92731 530 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 MS4A14Q96JA4 679 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 GSDMAQ96QA5 445 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 MTRQ99707 1265 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 CNNM2Q9H8M5 875 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 KRT14P02533 472 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
CTDP1-201ENST00000075430 NOC3LQ8WTT2 800 aaKnown RBP18.74■□□□□ 0.59
CTDP1-201ENST00000075430 CAPN7Q9Y6W3 813 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
CTDP1-201ENST00000075430 PDE8AO60658 829 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 PPFIA4O75335 1185 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 HERVK_113P62684 666 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 DNAAF5Q86Y56 855 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 NLRC4Q9NPP4 1024 aa18.74■□□□□ 0.59
CTDP1-201ENST00000075430 SHTN1A0MZ66 631 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 USP17L21D6R901 530 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 ADGRA1Q86SQ6 560 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 ENAHQ8N8S7 591 aaPredicted RBP18.73■□□□□ 0.59
CTDP1-201ENST00000075430 ARL8AQ96BM9 186 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 PACSIN2Q9UNF0 486 aaPredicted RBP18.73■□□□□ 0.59
CTDP1-201ENST00000075430 FAM169AQ9Y6X4 670 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 ABCC6O95255 1503 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 CDKAL1Q5VV42 579 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 ASIC1P78348 528 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 APBA1Q02410 837 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 HNRNPLLQ8WVV9 542 aaKnown RBP18.73■□□□□ 0.59
CTDP1-201ENST00000075430 CAPS2Q9BXY5 557 aa18.73■□□□□ 0.59
CTDP1-201ENST00000075430 NHEJ1Q9H9Q4 299 aaPredicted RBP18.73■□□□□ 0.59
CTDP1-201ENST00000075430 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
CTDP1-201ENST00000075430 ECM2O94769 699 aaPredicted RBP18.72■□□□□ 0.59
CTDP1-201ENST00000075430 GOLGA8HP0CJ92 632 aa18.72■□□□□ 0.59
CTDP1-201ENST00000075430 INF2Q27J81 1249 aa18.72■□□□□ 0.59
CTDP1-201ENST00000075430 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
CTDP1-201ENST00000075430 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
CTDP1-201ENST00000075430 SUSD4Q5VX71 490 aa18.72■□□□□ 0.59
CTDP1-201ENST00000075430 NOC4LQ9BVI4 516 aaKnown RBP18.72■□□□□ 0.59
CTDP1-201ENST00000075430 MED4Q9NPJ6 270 aa18.72■□□□□ 0.59
CTDP1-201ENST00000075430 PSD3Q9NYI0 1048 aa18.72■□□□□ 0.59
CTDP1-201ENST00000075430 CYP2D6P10635 497 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 TADA2BQ86TJ2 420 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 SLC39A2Q9NP94 309 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.59
CTDP1-201ENST00000075430 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 TSPY2A6NKD2 308 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 HLTFQ14527 1009 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTDP1-201ENST00000075430 PUM3Q15397 648 aaKnown RBP18.71■□□□□ 0.59
CTDP1-201ENST00000075430 HEATR3Q7Z4Q2 680 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 MAATS1Q7Z4T9 603 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 CCDC155Q8N6L0 562 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 TUBGCP2Q9BSJ2 902 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 KDM3BQ7LBC6 1761 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 IRAK1P51617 712 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 PDE4DQ08499 809 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 SLC4A9Q96Q91 983 aa18.71■□□□□ 0.59
CTDP1-201ENST00000075430 CCDC194A0A1B0GVG4 234 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 MYO1FO00160 1098 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 FCER1AP12319 257 aa18.7■□□□□ 0.58
CTDP1-201ENST00000075430 INPP5BP32019 993 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms