RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Spata21Q8BHW6 681 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Armc6Q8BNU0 468 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Plcg2Q8CIH5 1265 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Hps3Q91VB4 1002 aa24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Snw1Q9CSN1 536 aaKnown RBP24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Hic2Q9JLZ6 619 aaKnown RBP24.19■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Gucy1a2F8VQK3 730 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 PparaP23204 468 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Mcm3P25206 812 aaKnown RBP24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Zfp953Q3UPV7 304 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Vmn1r209Q5NC97 312 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 PigsQ6PD26 555 aaKnown RBP24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Trim29Q8R2Q0 587 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Epb41l2O70318 988 aaKnown RBP24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Tas2r124Q7M718 309 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Gpcpd1Q8C0L9 675 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Tmem60Q8K174 133 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Onecut3Q8K557 490 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Hexim1Q8R409 356 aaKnown RBP24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Tmem191cQ9JJB1 302 aa24.18■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 A0A0U1RNP2 1173 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Pagr1bF6V0H0 108 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 MycnP03966 462 aaKnown RBP24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 PtmaP26350 111 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Aco1P28271 889 aaKnown RBP24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 OatP29758 439 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Plekha7Q3UIL6 1118 aaKnown RBP24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Senp5Q6NXL6 749 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Pagr1aQ99L02 253 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Mettl16Q9CQG2 553 aaKnown RBP24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Nr2e3Q9QXZ7 395 aa24.17■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Wnt7aP24383 349 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Ankrd13cQ3UX43 541 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Prr7Q3V0I2 269 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Dppa3Q8QZY3 150 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Bst2Q8R2Q8 172 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Hnrnpul1Q8VDM6 859 aaKnown RBP24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Apobec3Q99J72 440 aaKnown RBP24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 4933402E13RikQ9D4D2 429 aa24.16■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Gm43738A0A0G2JEA5 862 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Mctp1E9PV86 951 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Tmem132bF7BAB2 1078 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Pfkfb1P70266 471 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Gtf2f1Q3THK3 508 aaKnown RBP24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Pla2g4eQ50L42 875 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Znf653Q6YND2 615 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Ddx55Q6ZPL9 600 aaKnown RBP24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 RubcnQ80U62 956 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Hook1Q8BIL5 728 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Haus7Q8BKT8 364 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Ccdc150Q8CDI7 1110 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Calml3Q9D6P8 149 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Btn2a2A4QPC6 514 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Sfi1Q3UZY0 1216 aaKnown RBP24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Oxr1Q4KMM3 866 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Trpv1Q704Y3 839 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 BC048507Q80ZS7 89 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Nod2Q8K3Z0 1020 aa24.15■■□□□ 1.46
Ccdc88a-202ENSMUST00000109477 Tbc1d2B1AVH7 922 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Stxbp3Q60770 592 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Hs2st1Q8R3H7 356 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Tesk2Q8VCT9 570 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Iqca1Q9CUL5 857 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Mrps25Q9D125 171 aaKnown RBP24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 CsadQ9DBE0 493 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Celf2Q9Z0H4 508 aaKnown RBP24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 S1pr4Q9Z0L1 386 aa24.14■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Rrp1P56183 494 aaKnown RBP24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Prpf4bQ61136 1007 aaKnown RBP24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Zfp341Q6PGC9 846 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Vgll2Q8BGW8 322 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Rec8Q8C5S7 591 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Lmbr1Q9JIT0 490 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Rbm46P86049 533 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Ulk4Q3V129 1303 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Tnni3kQ5GIG6 834 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Znf219Q6IQX8 726 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Ireb2Q811J3 963 aaKnown RBP24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Depdc1aQ8CIG0 804 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Oxnad1Q8VE38 311 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Tdrd1Q99MV1 1172 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Azi2Q9QYP6 405 aa24.13■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Dock2Q8C3J5 1828 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Kansl3A2RSY1 903 aaKnown RBP24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Dnaaf5B9EJR8 853 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Gm21969J3QJZ1 289 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Dapk3O54784 448 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Fgfr2P21803 821 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Irx3P81067 507 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Gtf3c3Q3TMP1 882 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Zfp51Q3U4L8 781 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Arhgef16Q3U5C8 713 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Ptger2Q62053 362 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Lrrd1Q8C0R9 853 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 MyripQ8K3I4 856 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Kctd10Q922M3 315 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Cul5Q9D5V5 780 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Plagl1Q9JLQ4 704 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 Ifi202Q9R002 445 aa24.12■■□□□ 1.45
Ccdc88a-202ENSMUST00000109477 LdhbP16125 334 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 22,080 RNA–protein pairs in 100.7 ms