RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Pcdha7Q91Y13 937 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 Ccdc7Q9D541 371 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 Cul7Q8VE73 1689 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 Cyp2c23E9Q5K4 494 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 CaluO35887 315 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 VimP20152 466 aaKnown RBP17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 Rapgef5Q8C0Q9 814 aa17.96■□□□□ 0.47
Col18a1-202ENSMUST00000081654 Kiaa0556Q8C753 1610 aa17.96■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ifi207E9Q3L4 978 aa17.96■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Retreg2Q6NS82 541 aa17.96■□□□□ 0.46
Col18a1-202ENSMUST00000081654 McamQ8R2Y2 648 aaKnown RBP17.96■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Stk32bQ9JJX8 414 aa17.96■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Gm11549A0A286YD83 63 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 U2af2P26369 475 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Pde6aP27664 859 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Sema3eP70275 775 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Pank2Q3U4S0 443 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Trim21Q62191 470 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Zcwpw1Q6IR42 630 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Cacna2d2Q6PHS9 1154 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Pank4Q80YV4 820 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ushbp1Q8R370 680 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Sar1bQ9CQC9 198 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Stk39Q9Z1W9 556 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Pex11aQ9Z211 246 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Vps52Q8C754 723 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Spats2Q8K1N4 545 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Pstpip2Q99M15 334 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Msh6P54276 1358 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Tnnc2P20801 160 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ppp1r37Q8BKR5 712 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 IarsQ8BU30 1262 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 C130026I21RikQ8C898 291 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 BbxQ8VBW5 907 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Actn2Q9JI91 894 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Frmpd4A2AFR3 1320 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Robo2Q7TPD3 1470 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Myo1fP70248 1099 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Bach2P97303 839 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Swap70Q6A028 585 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ccdc14Q8K2J4 934 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Eef1gQ9D8N0 437 aaKnown RBP17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Zfyve19Q9DAZ9 389 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Mkrn1Q9QXP6 481 aa17.95■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Tex13cD3YU32 604 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Eftud2O08810 971 aaKnown RBP17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ccdc114Q3UX62 658 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Map3k9Q3U1V8 1077 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Nom1Q3UFM5 854 aaKnown RBP17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Anks6Q6GQX6 883 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Znf365Q8BG89 408 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 GopcQ8BH60 463 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 CsadQ9DBE0 493 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Mroh9G5E8L9 891 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Mtx1P47802 317 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ccdc125Q5U465 500 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ahcyl2Q68FL4 613 aaKnown RBP17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Nme8Q715T0 586 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 TbcbQ9D1E6 244 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Kcnk13Q8R1P5 405 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Gbp7Q91Z40 638 aa17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Prpf3Q922U1 683 aaKnown RBP17.94■□□□□ 0.46
Col18a1-202ENSMUST00000081654 SkiQ60698 725 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Fgd5Q80UZ0 1219 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Mfap3Q922T2 349 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ebag9Q9D0V7 213 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Mphosph8Q3TYA6 858 aaKnown RBP17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ppp2r5eQ61151 467 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Glra4Q61603 456 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Madcam1Q61826 405 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Kif11Q6P9P6 1052 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Srp68Q8BMA6 625 aaKnown RBP17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Gna14P30677 355 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ctdspl2Q8BG15 465 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ddx39aQ8VDW0 427 aaKnown RBP17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Neurl4Q5NCX5 1563 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Tmod1P49813 359 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Stim2P83093 746 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 EgfrQ01279 1210 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Dzip3Q7TPV2 1204 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Spata2Q8K004 515 aa17.93■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Atp7bQ64446 1462 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Sox13Q04891 613 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Taok1Q5F2E8 1001 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Kif2bQ8C0N1 668 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Hgh1Q8C3I8 393 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 BaatQ91X34 420 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 1700020D05RikQ99PB1 294 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Aox2Q5SGK3 1345 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Calb1P12658 261 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 GalcP54818 684 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Sfi1Q3UZY0 1216 aaKnown RBP17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 YarsQ91WQ3 528 aaKnown RBP17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Strn3Q9ERG2 796 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Diaph2O70566 1098 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Bach1P97302 739 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Kctd1Q5M956 257 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Ccdc57Q6PHN1 1016 aa17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Lonp1Q8CGK3 949 aaKnown RBP17.92■□□□□ 0.46
Col18a1-202ENSMUST00000081654 Dph5Q9CWQ0 281 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms