RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Fbxo3Q9DC63 480 aa18.9■□□□□ 0.62
Ctcf-201ENSMUST00000005841 Klra17Q9JMA4 273 aa18.9■□□□□ 0.62
Ctcf-201ENSMUST00000005841 AarsQ8BGQ7 968 aa18.89■□□□□ 0.62
Ctcf-201ENSMUST00000005841 D130040H23RikQ8BII3 405 aa18.89■□□□□ 0.62
Ctcf-201ENSMUST00000005841 Eps8l2Q99K30 729 aa18.89■□□□□ 0.62
Ctcf-201ENSMUST00000005841 Scgb2b12S4R2L0 112 aa18.89■□□□□ 0.62
Ctcf-201ENSMUST00000005841 Phrf1A6H619 1682 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Gjb4Q02738 266 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Abtb2Q7TQI7 1024 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ube3cQ80U95 1083 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ndufb9Q9CQJ8 179 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Gm5134E9QAB5 671 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Cdh15P33146 784 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Rbm43Q99J64 343 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 MymkQ9D1N4 221 aa18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Mrpl12Q9DB15 201 aaKnown RBP18.89■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Nrxn3Q6P9K9 1571 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Zfp831A2ADM8 1628 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 CatspereP0DP43 985 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Rassf10Q8BL43 508 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 CactinQ9CS00 772 aaKnown RBP18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 AllcQ9JHX6 414 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Etnk2A7MCT6 385 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Msh3P13705 1091 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Smc4Q8CG47 1286 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Smc2Q8CG48 1191 aaKnown RBP18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Gle1Q8R322 699 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 CutaQ9CQ89 177 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tbc1d7Q9D0K0 293 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Anxa1P10107 346 aaKnown RBP18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Sun3Q5SS91 320 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ppp2r5bQ6PD28 497 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Aggf1Q7TN31 711 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tmem134Q8R0J4 195 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Mylk2Q8VCR8 613 aa18.88■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Duox1A2AQ92 1551 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Zscan20B2KFW1 1030 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Pde8bE9Q4S1 865 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Gigyf1Q99MR1 1044 aaKnown RBP18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ascc1Q9D8Z1 356 aaKnown RBP18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tlr9Q9EQU3 1032 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Pcdh11xF6ZNL5 1338 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Cct6aP80317 531 aaKnown RBP18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ttc7aQ8BGB2 858 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ube3aO08759 870 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Fbxo18Q8K2I9 1042 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Q91WD4 421 aa18.87■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Nck2O55033 380 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Pkn1P70268 946 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tacc1Q6Y685 774 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tor1aip1Q921T2 595 aaKnown RBP18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Mmtag2Q99LX5 260 aaKnown RBP18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Fam173bQ9D1Z3 247 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Lmbr1Q9JIT0 490 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Prl2c5Q9JLV9 222 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Krt24A1L317 512 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Naa35Q6PHQ8 725 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 GypcQ78HU7 95 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tbc1d5Q80XQ2 815 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 BbxQ8VBW5 907 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Plagl2Q925T4 496 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Six6os1Q9CTN5 574 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 LrmdaQ9D9B4 229 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 MeiocA2AG06 965 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Bnip3O55003 187 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Rnpc3Q3UZ01 514 aaKnown RBP18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 RragbQ6NTA4 374 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Riok1Q922Q2 567 aa18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Vwa5aQ99KC8 793 aaKnown RBP18.86■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Ccdc42Q5SV66 316 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 RgmbQ7TQ33 436 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 HyiQ8R1F5 277 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Erlin1Q91X78 346 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Cep83Q9D5R3 692 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 AmfrQ9R049 643 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 RaraP11416 462 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Cep95Q8BVV7 827 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Iws1Q8C1D8 766 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 WtapQ9ER69 396 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Sept3Q9Z1S5 350 aa18.85■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Togaram1Q6A070 1776 aaKnown RBP18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Bin2D3Z6Q9 489 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 GclcP97494 637 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Igbp1Q61249 340 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Dclk3Q8BWQ5 790 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Rab3il1Q8VDV3 383 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 March8Q9DBD2 286 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Dnai2A2AC93 623 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 MthfslL7N466 203 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Nrg3O35181 713 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Fam107bQ3TGF2 131 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Fermt2Q8CIB5 680 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Lztfl1Q9JHQ5 299 aa18.84■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Arhgap33Q80YF9 1305 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Rsph10bE9PYQ0 876 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Trappc10Q3TLI0 1259 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Tmprss11aQ3UQ41 389 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Lrrc55Q3UY51 311 aa18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Mars2Q499X9 586 aaKnown RBP18.83■□□□□ 0.61
Ctcf-201ENSMUST00000005841 Slc38a10Q5I012 1090 aa18.83■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 76.3 ms