RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SHP1P34223 423 aa3.76□□□□□ -1.81
RPA43YOR340C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
RPA43YOR340C TEF4P36008 412 aaKnown RBP3.76□□□□□ -1.81
RPA43YOR340C VPS8P39702 1274 aa3.76□□□□□ -1.81
RPA43YOR340C DPH1P40487 425 aaKnown RBP3.76□□□□□ -1.81
RPA43YOR340C LYS14P40971 790 aa3.76□□□□□ -1.81
RPA43YOR340C PSP1P50896 841 aaKnown RBP3.76□□□□□ -1.81
RPA43YOR340C SCS3P53012 380 aa3.76□□□□□ -1.81
RPA43YOR340C YPL108WQ02872 168 aaPredicted RBP3.76□□□□□ -1.81
RPA43YOR340C MYO5Q04439 1219 aaKnown RBP3.76□□□□□ -1.81
RPA43YOR340C ARO10Q06408 635 aa3.76□□□□□ -1.81
RPA43YOR340C SPN1Q06505 410 aaPredicted RBP3.76□□□□□ -1.81
RPA43YOR340C COX17Q12287 69 aa3.76□□□□□ -1.81
RPA43YOR340C ZPS1Q12512 249 aa3.76□□□□□ -1.81
RPA43YOR340C VPS13Q07878 3144 aa3.76□□□□□ -1.81
RPA43YOR340C UTR4P32626 227 aa3.75□□□□□ -1.81
RPA43YOR340C PEX2P32800 271 aa3.75□□□□□ -1.81
RPA43YOR340C CCL1P37366 393 aa3.75□□□□□ -1.81
RPA43YOR340C PHO88P38264 188 aaPredicted RBP3.75□□□□□ -1.81
RPA43YOR340C PAC2P39937 518 aa3.75□□□□□ -1.81
RPA43YOR340C VAB2P40003 282 aa3.75□□□□□ -1.81
RPA43YOR340C YER010CP40011 234 aa3.75□□□□□ -1.81
RPA43YOR340C ZAP1P47043 880 aa3.75□□□□□ -1.81
RPA43YOR340C SOL4P53315 255 aa3.75□□□□□ -1.81
RPA43YOR340C COQ6P53318 479 aa3.75□□□□□ -1.81
RPA43YOR340C CPR8P53728 308 aa3.75□□□□□ -1.81
RPA43YOR340C RPT6Q01939 405 aaKnown RBP3.75□□□□□ -1.81
RPA43YOR340C FMP30Q02883 468 aa3.75□□□□□ -1.81
RPA43YOR340C ULA1Q12059 462 aa3.75□□□□□ -1.81
RPA43YOR340C YOR111WQ99210 232 aa3.75□□□□□ -1.81
RPA43YOR340C UBR2Q07963 1872 aa3.75□□□□□ -1.81
RPA43YOR340C CPA2P03965 1118 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C ADE5,7P07244 802 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C VMA2P16140 517 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C PEP3P27801 918 aa3.74□□□□□ -1.81
RPA43YOR340C PAH1P32567 862 aa3.74□□□□□ -1.81
RPA43YOR340C CNS1P33313 385 aa3.74□□□□□ -1.81
RPA43YOR340C MUD2P36084 527 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C SDH8P38345 138 aa3.74□□□□□ -1.81
RPA43YOR340C AFG3P39925 761 aa3.74□□□□□ -1.81
RPA43YOR340C YEL068CP39977 110 aa3.74□□□□□ -1.81
RPA43YOR340C TMA108P40462 946 aa3.74□□□□□ -1.81
RPA43YOR340C YGL117WP53133 265 aa3.74□□□□□ -1.81
RPA43YOR340C YGL039WP53183 348 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C CBK1P53894 756 aa3.74□□□□□ -1.81
RPA43YOR340C USA1Q03714 838 aa3.74□□□□□ -1.81
RPA43YOR340C GFD1Q04839 188 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C SNO4Q04902 237 aa3.74□□□□□ -1.81
RPA43YOR340C VAM6Q07468 1049 aa3.74□□□□□ -1.81
RPA43YOR340C SLK19Q08581 821 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C HSP33Q08914 237 aaKnown RBP3.74□□□□□ -1.81
RPA43YOR340C HSP32Q08992 237 aa3.74□□□□□ -1.81
RPA43YOR340C WHI2P12611 486 aa3.73□□□□□ -1.81
RPA43YOR340C HSC82P15108 705 aaKnown RBP3.73□□□□□ -1.81
RPA43YOR340C SAN1P22470 610 aa3.73□□□□□ -1.81
RPA43YOR340C YUR1P26725 428 aa3.73□□□□□ -1.81
RPA43YOR340C YMC1P32331 307 aa3.73□□□□□ -1.81
RPA43YOR340C DBP7P36120 742 aaKnown RBP3.73□□□□□ -1.81
RPA43YOR340C VPS45P38932 577 aa3.73□□□□□ -1.81
RPA43YOR340C EPL1P43572 832 aa3.73□□□□□ -1.81
RPA43YOR340C COG1P53079 417 aa3.73□□□□□ -1.81
RPA43YOR340C MDM1Q01846 1127 aa3.73□□□□□ -1.81
RPA43YOR340C DSE3Q08729 430 aa3.73□□□□□ -1.81
RPA43YOR340C TY3A-GQ12173 290 aa3.73□□□□□ -1.81
RPA43YOR340C ERP3Q12403 225 aa3.73□□□□□ -1.81
RPA43YOR340C PNO1Q99216 274 aaKnown RBP3.73□□□□□ -1.81
RPA43YOR340C TY3A-IQ99219 290 aa3.73□□□□□ -1.81
RPA43YOR340C TY2A-LR1P0C2J4 438 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-FP0CX61 438 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-GR2P0CX62 438 aa3.72□□□□□ -1.81
RPA43YOR340C RNR3P21672 869 aaKnown RBP3.72□□□□□ -1.81
RPA43YOR340C TY2A-CP25383 438 aa3.72□□□□□ -1.81
RPA43YOR340C CBF2P32504 956 aa3.72□□□□□ -1.81
RPA43YOR340C MCR1P36060 302 aaKnown RBP3.72□□□□□ -1.81
RPA43YOR340C FLO10P36170 1169 aa3.72□□□□□ -1.81
RPA43YOR340C LNP1P38878 278 aa3.72□□□□□ -1.81
RPA43YOR340C RIC1P40395 1056 aa3.72□□□□□ -1.81
RPA43YOR340C ASE1P50275 885 aa3.72□□□□□ -1.81
RPA43YOR340C IMO32P53219 342 aa3.72□□□□□ -1.81
RPA43YOR340C SLD5Q03406 294 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-DR2Q03483 438 aa3.72□□□□□ -1.81
RPA43YOR340C YMR321CQ04898 105 aa3.72□□□□□ -1.81
RPA43YOR340C STP3Q05937 343 aa3.72□□□□□ -1.81
RPA43YOR340C SPH1Q06160 661 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-BQ12260 438 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-OR2Q12293 438 aa3.72□□□□□ -1.81
RPA43YOR340C NDJ1Q12366 352 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-DR1Q12392 438 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-OR1Q12439 438 aa3.72□□□□□ -1.81
RPA43YOR340C YER175W-AQ8TGU4 54 aa3.72□□□□□ -1.81
RPA43YOR340C TY2A-DR3Q99303 438 aa3.72□□□□□ -1.81
RPA43YOR340C RIF1P29539 1916 aa3.72□□□□□ -1.81
RPA43YOR340C ATP2P00830 511 aaKnown RBP3.71□□□□□ -1.82
RPA43YOR340C RPL7AP05737 244 aaKnown RBP3.71□□□□□ -1.82
RPA43YOR340C FUM1P08417 488 aaKnown RBP3.71□□□□□ -1.82
RPA43YOR340C HEM1P09950 548 aaPredicted RBP3.71□□□□□ -1.82
RPA43YOR340C YPK1P12688 680 aaKnown RBP3.71□□□□□ -1.82
RPA43YOR340C AAC3P18238 307 aa3.71□□□□□ -1.82
RPA43YOR340C VPS1P21576 704 aaKnown RBP3.71□□□□□ -1.82
RPA43YOR340C AAD3P25612 363 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms