RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C RAX1Q08760 435 aa12.28□□□□□ -0.44
BDF1YLR399C ATP16Q12165 160 aa12.28□□□□□ -0.44
BDF1YLR399C COX4P04037 155 aa12.27□□□□□ -0.45
BDF1YLR399C ABF1P14164 731 aa12.27□□□□□ -0.45
BDF1YLR399C ERG6P25087 383 aaKnown RBP12.27□□□□□ -0.45
BDF1YLR399C NDI1P32340 513 aa12.27□□□□□ -0.45
BDF1YLR399C UTR2P32623 467 aa12.27□□□□□ -0.45
BDF1YLR399C DSS1P39112 969 aa12.27□□□□□ -0.45
BDF1YLR399C RRP17Q04031 235 aaPredicted RBP12.27□□□□□ -0.45
BDF1YLR399C PGC1Q08959 321 aa12.27□□□□□ -0.45
BDF1YLR399C COX6P00427 148 aa12.26□□□□□ -0.45
BDF1YLR399C KGD1P20967 1014 aaKnown RBP12.26□□□□□ -0.45
BDF1YLR399C YSP3P25036 478 aa12.26□□□□□ -0.45
BDF1YLR399C YCL068CP25593 260 aa12.26□□□□□ -0.45
BDF1YLR399C REF2P42073 533 aaPredicted RBP12.26□□□□□ -0.45
BDF1YLR399C AIM23P47015 356 aa12.26□□□□□ -0.45
BDF1YLR399C HOC1P47124 396 aa12.26□□□□□ -0.45
BDF1YLR399C AZR1P50080 613 aa12.26□□□□□ -0.45
BDF1YLR399C RTT102P53330 157 aa12.26□□□□□ -0.45
BDF1YLR399C AIM39Q08223 395 aa12.26□□□□□ -0.45
BDF1YLR399C FMP16Q12497 93 aa12.26□□□□□ -0.45
BDF1YLR399C AMD2P22580 549 aa12.26□□□□□ -0.45
BDF1YLR399C PHO84P25297 587 aaKnown RBP12.26□□□□□ -0.45
BDF1YLR399C MRP4P32902 394 aa12.26□□□□□ -0.45
BDF1YLR399C RIM11P38615 370 aa12.26□□□□□ -0.45
BDF1YLR399C YHL012WP38709 493 aa12.26□□□□□ -0.45
BDF1YLR399C MTG2P38860 518 aa12.26□□□□□ -0.45
BDF1YLR399C ERP2P39704 215 aa12.26□□□□□ -0.45
BDF1YLR399C SLD5Q03406 294 aa12.26□□□□□ -0.45
BDF1YLR399C CDC123Q05791 360 aa12.26□□□□□ -0.45
BDF1YLR399C EMG1Q06287 252 aaKnown RBP12.26□□□□□ -0.45
BDF1YLR399C THI21Q08975 551 aa12.26□□□□□ -0.45
BDF1YLR399C GCD11P32481 527 aaKnown RBP12.25□□□□□ -0.45
BDF1YLR399C YKL063CP35725 167 aa12.25□□□□□ -0.45
BDF1YLR399C ECM8P38246 354 aa12.25□□□□□ -0.45
BDF1YLR399C FAD1P38913 306 aa12.25□□□□□ -0.45
BDF1YLR399C NPR2P39923 615 aa12.25□□□□□ -0.45
BDF1YLR399C IMA5P40884 581 aa12.25□□□□□ -0.45
BDF1YLR399C YPR003CP53394 754 aa12.25□□□□□ -0.45
BDF1YLR399C DBP6P53734 629 aaKnown RBP12.25□□□□□ -0.45
BDF1YLR399C MUK1Q02866 612 aa12.25□□□□□ -0.45
BDF1YLR399C PEX12Q04370 399 aa12.25□□□□□ -0.45
BDF1YLR399C APC4Q04601 652 aa12.25□□□□□ -0.45
BDF1YLR399C HDA3Q06623 655 aa12.25□□□□□ -0.45
BDF1YLR399C SAM4Q08985 325 aaKnown RBP12.25□□□□□ -0.45
BDF1YLR399C GTT2Q12390 233 aa12.25□□□□□ -0.45
BDF1YLR399C ADE5,7P07244 802 aaKnown RBP12.25□□□□□ -0.45
BDF1YLR399C KIN82P25341 720 aa12.25□□□□□ -0.45
BDF1YLR399C IMP3P32899 183 aaPredicted RBP12.25□□□□□ -0.45
BDF1YLR399C GLG1P36143 616 aa12.25□□□□□ -0.45
BDF1YLR399C GLY1P37303 387 aaKnown RBP12.25□□□□□ -0.45
BDF1YLR399C CLD1P53264 445 aa12.25□□□□□ -0.45
BDF1YLR399C RSC2Q06488 889 aa12.25□□□□□ -0.45
BDF1YLR399C ENA1P13587 1091 aa12.24□□□□□ -0.45
BDF1YLR399C YHI9P38765 294 aa12.24□□□□□ -0.45
BDF1YLR399C YEL020CP39994 560 aa12.24□□□□□ -0.45
BDF1YLR399C RRT6P53117 311 aaPredicted RBP12.24□□□□□ -0.45
BDF1YLR399C ENA2Q01896 1091 aa12.24□□□□□ -0.45
BDF1YLR399C TRM12Q04235 462 aa12.24□□□□□ -0.45
BDF1YLR399C ECM30Q06673 1274 aa12.24□□□□□ -0.45
BDF1YLR399C YDL109CQ12103 647 aa12.24□□□□□ -0.45
BDF1YLR399C ENA5Q12691 1091 aa12.24□□□□□ -0.45
BDF1YLR399C TRP3P00937 484 aa12.23□□□□□ -0.45
BDF1YLR399C TUB2P02557 457 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C ACO1P19414 778 aaKnown RBP RIP-Chip data12.23□□□□□ -0.45not detected
BDF1YLR399C SAR1P20606 190 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C ASF2P32448 525 aaPredicted RBP12.23□□□□□ -0.45
BDF1YLR399C PRP21P32524 280 aaPredicted RBP12.23□□□□□ -0.45
BDF1YLR399C PHO88P38264 188 aaPredicted RBP12.23□□□□□ -0.45
BDF1YLR399C GPB2P39717 880 aa12.23□□□□□ -0.45
BDF1YLR399C YGR210CP42942 411 aa12.23□□□□□ -0.45
BDF1YLR399C STB4P50104 949 aa12.23□□□□□ -0.45
BDF1YLR399C ARO8P53090 500 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C LSM3P57743 89 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C YDR090CQ03193 310 aa12.23□□□□□ -0.45
BDF1YLR399C HFI1Q12060 488 aa12.23□□□□□ -0.45
BDF1YLR399C PUT4P15380 627 aa12.23□□□□□ -0.45
BDF1YLR399C CLB3P24870 427 aa12.23□□□□□ -0.45
BDF1YLR399C PPZ1P26570 692 aa12.23□□□□□ -0.45
BDF1YLR399C RIM1P32445 135 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C TFA2P36145 328 aa12.23□□□□□ -0.45
BDF1YLR399C MNN2P38069 597 aa12.23□□□□□ -0.45
BDF1YLR399C MIT1P40002 666 aa12.23□□□□□ -0.45
BDF1YLR399C SAP4P53036 818 aa12.23□□□□□ -0.45
BDF1YLR399C IMA1P53051 589 aa12.23□□□□□ -0.45
BDF1YLR399C ZRG17P53735 605 aa12.23□□□□□ -0.45
BDF1YLR399C SPR6Q01684 191 aa12.23□□□□□ -0.45
BDF1YLR399C DCS1Q06151 350 aa12.23□□□□□ -0.45
BDF1YLR399C IES4Q08561 116 aa12.23□□□□□ -0.45
BDF1YLR399C SLF1Q12034 447 aaKnown RBP12.23□□□□□ -0.45
BDF1YLR399C SUC2P00724 532 aa12.22□□□□□ -0.45
BDF1YLR399C RPL24BP24000 155 aaKnown RBP12.22□□□□□ -0.45
BDF1YLR399C NTG1P31378 399 aa12.22□□□□□ -0.45
BDF1YLR399C VMA8P32610 256 aaKnown RBP12.22□□□□□ -0.45
BDF1YLR399C YHR218WP38899 603 aa12.22□□□□□ -0.45
BDF1YLR399C RBG1P39729 369 aa12.22□□□□□ -0.45
BDF1YLR399C MAF1P41910 395 aa12.22□□□□□ -0.45
BDF1YLR399C YGL036WP53185 909 aaPredicted RBP12.22□□□□□ -0.45
BDF1YLR399C RKM2Q03942 479 aa12.22□□□□□ -0.45
BDF1YLR399C ENT2Q05785 613 aa12.22□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms