RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C RIX7Q07844 837 aaKnown RBP3.44□□□□□ -1.86
VAB2YEL005C GPN2Q08726 347 aaPredicted RBP3.44□□□□□ -1.86
VAB2YEL005C YDR056CQ12025 205 aa3.44□□□□□ -1.86
VAB2YEL005C YBR126W-AQ8TGU7 68 aa3.44□□□□□ -1.86
VAB2YEL005C PET111P08468 800 aa3.43□□□□□ -1.86
VAB2YEL005C GPA1P08539 472 aa3.43□□□□□ -1.86
VAB2YEL005C TKL1P23254 680 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C CNA1P23287 553 aa3.43□□□□□ -1.86
VAB2YEL005C LCB1P25045 558 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C SAC1P32368 623 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C SWE1P32944 819 aa3.43□□□□□ -1.86
VAB2YEL005C YMR124WP39523 943 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C RPN11P43588 306 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C RPS7BP48164 190 aaKnown RBP3.43□□□□□ -1.86
VAB2YEL005C YPT11P48559 417 aa3.43□□□□□ -1.86
VAB2YEL005C DIA3P52290 468 aa3.43□□□□□ -1.86
VAB2YEL005C INP53Q12271 1107 aa3.43□□□□□ -1.86
VAB2YEL005C SEC53P07283 254 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C KRS1P15180 591 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C SAN1P22470 610 aa3.42□□□□□ -1.86
VAB2YEL005C SAC6P32599 642 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C NOP4P37838 685 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C MAL33P38157 468 aa3.42□□□□□ -1.86
VAB2YEL005C TOM71P38825 639 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C SPC97P38863 823 aa3.42□□□□□ -1.86
VAB2YEL005C UIP3P39547 235 aa3.42□□□□□ -1.86
VAB2YEL005C NOP16P40007 231 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C YIR016WP40572 265 aa3.42□□□□□ -1.86
VAB2YEL005C CDC1P40986 491 aa3.42□□□□□ -1.86
VAB2YEL005C SIP4P46954 829 aa3.42□□□□□ -1.86
VAB2YEL005C YGL036WP53185 909 aaPredicted RBP3.42□□□□□ -1.86
VAB2YEL005C YNL234WP53857 426 aa3.42□□□□□ -1.86
VAB2YEL005C YSA1Q01976 231 aa3.42□□□□□ -1.86
VAB2YEL005C SVL3Q03088 825 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C BUD22Q04347 519 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C PIG1Q06216 648 aa3.42□□□□□ -1.86
VAB2YEL005C MCP2Q06567 569 aa3.42□□□□□ -1.86
VAB2YEL005C VIP1Q06685 1146 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C NOP58Q12499 511 aaKnown RBP3.42□□□□□ -1.86
VAB2YEL005C YPR089WO13585 888 aa3.41□□□□□ -1.86
VAB2YEL005C AAC3P18238 307 aa3.41□□□□□ -1.86
VAB2YEL005C RPB8P20436 146 aa3.41□□□□□ -1.86
VAB2YEL005C ADH7P25377 361 aa3.41□□□□□ -1.86
VAB2YEL005C PDB1P32473 366 aaKnown RBP3.41□□□□□ -1.86
VAB2YEL005C PXL1P36166 706 aa3.41□□□□□ -1.86
VAB2YEL005C RFC1P38630 861 aaKnown RBP3.41□□□□□ -1.86
VAB2YEL005C DIA4P38705 446 aaPredicted RBP3.41□□□□□ -1.86
VAB2YEL005C YNG2P38806 282 aaKnown RBP3.41□□□□□ -1.86
VAB2YEL005C PIL1P53252 339 aaKnown RBP3.41□□□□□ -1.86
VAB2YEL005C YGR127WP53275 312 aa3.41□□□□□ -1.86
VAB2YEL005C INN1P53901 409 aa3.41□□□□□ -1.86
VAB2YEL005C YMR178WQ03219 274 aaKnown RBP3.41□□□□□ -1.86
VAB2YEL005C ARP9Q05123 467 aa3.41□□□□□ -1.86
VAB2YEL005C RGT2Q12300 763 aa3.41□□□□□ -1.86
VAB2YEL005C YER145C-AA0A023PYF4 145 aa3.4□□□□□ -1.87
VAB2YEL005C SEM1O94742 89 aa3.4□□□□□ -1.87
VAB2YEL005C PEP3P27801 918 aa3.4□□□□□ -1.87
VAB2YEL005C RPN12P32496 274 aa3.4□□□□□ -1.87
VAB2YEL005C AUR1P36107 401 aaPredicted RBP3.4□□□□□ -1.87
VAB2YEL005C FMP10P40098 244 aa3.4□□□□□ -1.87
VAB2YEL005C PTR3P43606 678 aa3.4□□□□□ -1.87
VAB2YEL005C DUO1P53168 247 aaKnown RBP3.4□□□□□ -1.87
VAB2YEL005C INA17Q02888 182 aa3.4□□□□□ -1.87
VAB2YEL005C YML037CQ03703 340 aa3.4□□□□□ -1.87
VAB2YEL005C POS5Q06892 414 aa3.4□□□□□ -1.87
VAB2YEL005C FRE3Q08905 711 aa3.4□□□□□ -1.87
VAB2YEL005C RCN2Q12044 265 aa3.4□□□□□ -1.87
VAB2YEL005C HER1Q12276 1246 aa3.4□□□□□ -1.87
VAB2YEL005C GAL4P04386 881 aa3.39□□□□□ -1.87
VAB2YEL005C YCK1P23291 538 aa3.39□□□□□ -1.87
VAB2YEL005C YIH1P25637 258 aa3.39□□□□□ -1.87
VAB2YEL005C DBP8P38719 431 aa3.39□□□□□ -1.87
VAB2YEL005C PCI8P40512 444 aa3.39□□□□□ -1.87
VAB2YEL005C RMD8P43620 662 aa3.39□□□□□ -1.87
VAB2YEL005C STR3P53101 465 aaKnown RBP3.39□□□□□ -1.87
VAB2YEL005C SCW4P53334 386 aaKnown RBP3.39□□□□□ -1.87
VAB2YEL005C YNR061CP53747 219 aa3.39□□□□□ -1.87
VAB2YEL005C UTP21Q06078 939 aaPredicted RBP3.39□□□□□ -1.87
VAB2YEL005C ATX2Q12067 313 aa3.39□□□□□ -1.87
VAB2YEL005C LEU9Q12166 604 aaKnown RBP3.39□□□□□ -1.87
VAB2YEL005C RPL19AP0CX82 189 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C RPL19BP0CX83 189 aaPredicted RBP3.38□□□□□ -1.87
VAB2YEL005C PWP1P21304 576 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C STE50P25344 346 aa3.38□□□□□ -1.87
VAB2YEL005C POL4P25615 582 aa3.38□□□□□ -1.87
VAB2YEL005C MGM1P32266 881 aa3.38□□□□□ -1.87
VAB2YEL005C SNU114P36048 1008 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C REG2P38232 338 aa3.38□□□□□ -1.87
VAB2YEL005C ERP2P39704 215 aa3.38□□□□□ -1.87
VAB2YEL005C FAR3P46671 204 aa3.38□□□□□ -1.87
VAB2YEL005C MDV1P47025 714 aa3.38□□□□□ -1.87
VAB2YEL005C SGF73P53165 657 aa3.38□□□□□ -1.87
VAB2YEL005C YTP1P53584 459 aa3.38□□□□□ -1.87
VAB2YEL005C MPS1P54199 764 aa3.38□□□□□ -1.87
VAB2YEL005C RPT6Q01939 405 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C CTL1Q03220 320 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C EMI2Q04409 500 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C ARP10Q04549 284 aa3.38□□□□□ -1.87
VAB2YEL005C DPB4Q04603 196 aaKnown RBP3.38□□□□□ -1.87
VAB2YEL005C ECI1Q05871 280 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms