RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C FUN12P39730 1002 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C POL31P46957 487 aa1.73□□□□□ -2.13
VPS54YDR027C CUL3P53202 744 aa1.73□□□□□ -2.13
VPS54YDR027C IMP4P53941 290 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C CEG1Q01159 459 aaPredicted RBP1.73□□□□□ -2.13
VPS54YDR027C ATG16Q03818 150 aa1.73□□□□□ -2.13
VPS54YDR027C VPS64Q03944 604 aa1.73□□□□□ -2.13
VPS54YDR027C YLR352WQ06479 807 aa1.73□□□□□ -2.13
VPS54YDR027C MLC2Q06580 163 aa1.73□□□□□ -2.13
VPS54YDR027C APL5Q08951 932 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C GCN1P33892 2672 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C YML002WP0CF17 737 aa1.73□□□□□ -2.13
VPS54YDR027C TRX2P22803 104 aaKnown RBP1.73□□□□□ -2.13
VPS54YDR027C SPT7P35177 1332 aa1.73□□□□□ -2.13
VPS54YDR027C GEA1P47102 1408 aaPredicted RBP1.73□□□□□ -2.13
VPS54YDR027C COX1P00401 534 aa1.73□□□□□ -2.13
VPS54YDR027C HNM1P19807 563 aa1.73□□□□□ -2.13
VPS54YDR027C HIS6P40545 261 aa1.73□□□□□ -2.13
VPS54YDR027C DOT5P40553 215 aa1.73□□□□□ -2.13
VPS54YDR027C FRE3Q08905 711 aa1.73□□□□□ -2.13
VPS54YDR027C NUR1Q12066 484 aa1.73□□□□□ -2.13
VPS54YDR027C URB1P34241 1764 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C CYB2P00175 591 aa1.72□□□□□ -2.13
VPS54YDR027C CBP1P07252 654 aa1.72□□□□□ -2.13
VPS54YDR027C YKL133CP36066 463 aa1.72□□□□□ -2.13
VPS54YDR027C YHL041WP38730 149 aa1.72□□□□□ -2.13
VPS54YDR027C YJL070CP40361 888 aa1.72□□□□□ -2.13
VPS54YDR027C IML2P47031 731 aa1.72□□□□□ -2.13
VPS54YDR027C CNM67P53865 581 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C MOT3P54785 490 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C SVL3Q03088 825 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C RSA1Q08932 381 aa1.72□□□□□ -2.13
VPS54YDR027C YOL114CQ12322 202 aa1.72□□□□□ -2.13
VPS54YDR027C MSS18P08593 268 aa1.72□□□□□ -2.13
VPS54YDR027C PRO3P32263 286 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C RAD24P32641 659 aa1.72□□□□□ -2.13
VPS54YDR027C TGL1P34163 548 aa1.72□□□□□ -2.13
VPS54YDR027C EXO84P38261 753 aa1.72□□□□□ -2.13
VPS54YDR027C EFM2P38347 419 aa1.72□□□□□ -2.13
VPS54YDR027C YGR021WP53212 290 aa1.72□□□□□ -2.13
VPS54YDR027C ESF2P53743 316 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C YNL181WP53878 407 aa1.72□□□□□ -2.13
VPS54YDR027C SUB1P54000 292 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C CRD1Q07560 283 aa1.72□□□□□ -2.13
VPS54YDR027C RRP6Q12149 733 aaKnown RBP1.72□□□□□ -2.13
VPS54YDR027C VAS1P07806 1104 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C SUI3P09064 285 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C PMS1P14242 873 aa1.71□□□□□ -2.14
VPS54YDR027C PHO3P24031 467 aa1.71□□□□□ -2.14
VPS54YDR027C SEC1P30619 724 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C HES1P35843 434 aa1.71□□□□□ -2.14
VPS54YDR027C SCS2P40075 244 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C IMA5P40884 581 aa1.71□□□□□ -2.14
VPS54YDR027C ERR3P42222 437 aa1.71□□□□□ -2.14
VPS54YDR027C ATG27P46989 271 aa1.71□□□□□ -2.14
VPS54YDR027C TAN1P53072 289 aaPredicted RBP1.71□□□□□ -2.14
VPS54YDR027C YNL234WP53857 426 aa1.71□□□□□ -2.14
VPS54YDR027C VMS1Q04311 632 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C HIM1Q06674 414 aa1.71□□□□□ -2.14
VPS54YDR027C BRE1Q07457 700 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C ROM2P51862 1356 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C MRP2P10663 115 aaPredicted RBP1.71□□□□□ -2.14
VPS54YDR027C RPN2P32565 945 aaKnown RBP1.71□□□□□ -2.14
VPS54YDR027C TRS65P32893 560 aa1.71□□□□□ -2.14
VPS54YDR027C ASK10P48361 1146 aa1.71□□□□□ -2.14
VPS54YDR027C YDR109CQ04585 715 aa1.71□□□□□ -2.14
VPS54YDR027C YDL121CQ07541 149 aa1.71□□□□□ -2.14
VPS54YDR027C RAD9P14737 1309 aa1.71□□□□□ -2.14
VPS54YDR027C GPA1P08539 472 aa1.7□□□□□ -2.14
VPS54YDR027C ADH4P10127 382 aa1.7□□□□□ -2.14
VPS54YDR027C MGR1P25573 417 aa1.7□□□□□ -2.14
VPS54YDR027C CPR3P25719 182 aa1.7□□□□□ -2.14
VPS54YDR027C DBF20P32328 564 aa1.7□□□□□ -2.14
VPS54YDR027C MRS6P32864 603 aaKnown RBP1.7□□□□□ -2.14
VPS54YDR027C SDS22P36047 338 aa1.7□□□□□ -2.14
VPS54YDR027C YLF2P38746 405 aa1.7□□□□□ -2.14
VPS54YDR027C RPT2P40327 437 aaKnown RBP1.7□□□□□ -2.14
VPS54YDR027C MHP1P43638 1398 aa1.7□□□□□ -2.14
VPS54YDR027C MAD3P47074 515 aa1.7□□□□□ -2.14
VPS54YDR027C YGR079WP53249 370 aa1.7□□□□□ -2.14
VPS54YDR027C CIA1Q05583 330 aa1.7□□□□□ -2.14
VPS54YDR027C UTP21Q06078 939 aaPredicted RBP1.7□□□□□ -2.14
VPS54YDR027C AIM6Q07716 390 aa1.7□□□□□ -2.14
VPS54YDR027C YLR049CQ12110 428 aa1.7□□□□□ -2.14
VPS54YDR027C CFT1Q06632 1357 aaKnown RBP1.7□□□□□ -2.14
VPS54YDR027C GUK1P15454 187 aaKnown RBP1.7□□□□□ -2.14
VPS54YDR027C SPC72P39723 622 aa1.7□□□□□ -2.14
VPS54YDR027C SAW1P39735 261 aa1.7□□□□□ -2.14
VPS54YDR027C PDA1P16387 420 aaKnown RBP1.69□□□□□ -2.14
VPS54YDR027C SAN1P22470 610 aa1.69□□□□□ -2.14
VPS54YDR027C ACA1P39970 489 aa1.69□□□□□ -2.14
VPS54YDR027C SAP185P40856 1058 aa1.69□□□□□ -2.14
VPS54YDR027C PUS4P48567 403 aaKnown RBP1.69□□□□□ -2.14
VPS54YDR027C TEP1P53916 434 aa1.69□□□□□ -2.14
VPS54YDR027C GTR1Q00582 310 aa1.69□□□□□ -2.14
VPS54YDR027C AAD4Q07747 329 aa1.69□□□□□ -2.14
VPS54YDR027C ARP7Q12406 477 aa1.69□□□□□ -2.14
VPS54YDR027C FAB1P34756 2278 aa1.69□□□□□ -2.14
VPS54YDR027C YER145C-AA0A023PYF4 145 aa1.69□□□□□ -2.14
VPS54YDR027C BAR1P12630 587 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms