RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C ARO3P14843 370 aaKnown RBP5.7□□□□□ -1.5
PDB1YBR221C SWI4P25302 1093 aaKnown RBP5.7□□□□□ -1.5
PDB1YBR221C RDS1P25611 832 aa5.7□□□□□ -1.5
PDB1YBR221C ERG1P32476 496 aaKnown RBP5.7□□□□□ -1.5
PDB1YBR221C MRPL37P36532 105 aa5.7□□□□□ -1.5
PDB1YBR221C YEL076CP39971 216 aa5.7□□□□□ -1.5
PDB1YBR221C MSS2P40990 351 aa5.7□□□□□ -1.5
PDB1YBR221C IAH1P41734 238 aa5.7□□□□□ -1.5
PDB1YBR221C YRB1P41920 201 aaKnown RBP5.7□□□□□ -1.5
PDB1YBR221C CAK1P43568 368 aaPredicted RBP5.7□□□□□ -1.5
PDB1YBR221C PTK2P47116 818 aaKnown RBP5.7□□□□□ -1.5
PDB1YBR221C HXT16P47185 567 aa5.7□□□□□ -1.5
PDB1YBR221C IMA1P53051 589 aa5.7□□□□□ -1.5
PDB1YBR221C PIB2P53191 635 aa5.7□□□□□ -1.5
PDB1YBR221C GCR2Q01722 534 aa5.7□□□□□ -1.5
PDB1YBR221C MUK1Q02866 612 aa5.7□□□□□ -1.5
PDB1YBR221C YMR210WQ03649 449 aa5.7□□□□□ -1.5
PDB1YBR221C RKM2Q03942 479 aa5.7□□□□□ -1.5
PDB1YBR221C VPS20Q04272 221 aa5.7□□□□□ -1.5
PDB1YBR221C URC2Q04411 772 aa5.7□□□□□ -1.5
PDB1YBR221C RCO1Q04779 684 aa5.7□□□□□ -1.5
PDB1YBR221C NNT1Q05874 261 aa5.7□□□□□ -1.5
PDB1YBR221C YLR455WQ06188 304 aa5.7□□□□□ -1.5
PDB1YBR221C ATG26Q06321 1198 aa5.7□□□□□ -1.5
PDB1YBR221C PEX19Q07418 342 aa5.7□□□□□ -1.5
PDB1YBR221C ULA1Q12059 462 aa5.7□□□□□ -1.5
PDB1YBR221C MED4Q12343 284 aa5.7□□□□□ -1.5
PDB1YBR221C NBL1Q3E7Y6 73 aa5.7□□□□□ -1.5
PDB1YBR221C RAD61Q99359 647 aa5.7□□□□□ -1.5
PDB1YBR221C HKR1P41809 1802 aa5.69□□□□□ -1.5
PDB1YBR221C GLN4P13188 809 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C CDC26P14724 124 aa5.69□□□□□ -1.5
PDB1YBR221C PDC6P26263 563 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C BUD14P27637 709 aa5.69□□□□□ -1.5
PDB1YBR221C MRP20P32387 263 aa5.69□□□□□ -1.5
PDB1YBR221C MIA40P36046 403 aa5.69□□□□□ -1.5
PDB1YBR221C REG2P38232 338 aa5.69□□□□□ -1.5
PDB1YBR221C VID24P38263 362 aa5.69□□□□□ -1.5
PDB1YBR221C ERG7P38604 731 aa5.69□□□□□ -1.5
PDB1YBR221C FSH1P38777 243 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C BZZ1P38822 633 aa5.69□□□□□ -1.5
PDB1YBR221C MNN9P39107 395 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C RGI2P40188 164 aa5.69□□□□□ -1.5
PDB1YBR221C MET28P40573 187 aa5.69□□□□□ -1.5
PDB1YBR221C RRN7P40992 514 aa5.69□□□□□ -1.5
PDB1YBR221C JJJ2P46997 583 aa5.69□□□□□ -1.5
PDB1YBR221C NET1P47035 1189 aa5.69□□□□□ -1.5
PDB1YBR221C VPS62P53285 467 aa5.69□□□□□ -1.5
PDB1YBR221C IRC4Q03036 179 aa5.69□□□□□ -1.5
PDB1YBR221C PEX29Q03370 554 aa5.69□□□□□ -1.5
PDB1YBR221C PPM1Q04081 328 aa5.69□□□□□ -1.5
PDB1YBR221C UFO1Q04511 668 aa5.69□□□□□ -1.5
PDB1YBR221C YLR297WQ05899 129 aa5.69□□□□□ -1.5
PDB1YBR221C RPN7Q06103 429 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C YLR173WQ06247 608 aa5.69□□□□□ -1.5
PDB1YBR221C ENT4Q07872 247 aa5.69□□□□□ -1.5
PDB1YBR221C DCI1Q08558 271 aa5.69□□□□□ -1.5
PDB1YBR221C YPL277CQ08989 487 aa5.69□□□□□ -1.5
PDB1YBR221C DIN7Q12086 430 aa5.69□□□□□ -1.5
PDB1YBR221C LEU9Q12166 604 aaKnown RBP5.69□□□□□ -1.5
PDB1YBR221C COX17Q12287 69 aa5.69□□□□□ -1.5
PDB1YBR221C TFB5Q3E7C1 72 aaPredicted RBP5.69□□□□□ -1.5
PDB1YBR221C ISN1Q99312 450 aa5.69□□□□□ -1.5
PDB1YBR221C CDC36P06100 191 aaPredicted RBP5.68□□□□□ -1.5
PDB1YBR221C ARG80P07249 177 aa5.68□□□□□ -1.5
PDB1YBR221C PRP2P20095 876 aaPredicted RBP5.68□□□□□ -1.5
PDB1YBR221C RIT1P23796 513 aa5.68□□□□□ -1.5
PDB1YBR221C ERG6P25087 383 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C YCR016WP25617 290 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C CRM1P30822 1084 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C KNS1P32350 737 aaPredicted RBP5.68□□□□□ -1.5
PDB1YBR221C SEF1P34228 1148 aa5.68□□□□□ -1.5
PDB1YBR221C ATP3P38077 311 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C MAK5P38112 773 aaPredicted RBP5.68□□□□□ -1.5
PDB1YBR221C ALG3P38179 458 aa5.68□□□□□ -1.5
PDB1YBR221C ATG14P38270 344 aa5.68□□□□□ -1.5
PDB1YBR221C DLD3P39976 496 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C TMN3P40071 706 aa5.68□□□□□ -1.5
PDB1YBR221C RLP7P40693 322 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C MID1P41821 548 aa5.68□□□□□ -1.5
PDB1YBR221C BST1P43571 1029 aa5.68□□□□□ -1.5
PDB1YBR221C YFR018CP43599 363 aa5.68□□□□□ -1.5
PDB1YBR221C TAF4P50105 388 aa5.68□□□□□ -1.5
PDB1YBR221C GLO1P50107 326 aa5.68□□□□□ -1.5
PDB1YBR221C RPM2Q02773 1202 aa5.68□□□□□ -1.5
PDB1YBR221C RAD30Q04049 632 aa5.68□□□□□ -1.5
PDB1YBR221C CSI1Q04368 295 aa5.68□□□□□ -1.5
PDB1YBR221C GTO3Q04806 366 aa5.68□□□□□ -1.5
PDB1YBR221C TRI1Q05024 226 aa5.68□□□□□ -1.5
PDB1YBR221C ECM30Q06673 1274 aa5.68□□□□□ -1.5
PDB1YBR221C RSB1Q08417 382 aa5.68□□□□□ -1.5
PDB1YBR221C YOR059CQ08448 450 aaKnown RBP5.68□□□□□ -1.5
PDB1YBR221C RTK1Q12100 620 aaPredicted RBP5.68□□□□□ -1.5
PDB1YBR221C YVC1Q12324 675 aa5.68□□□□□ -1.5
PDB1YBR221C GIS3Q12418 502 aa5.68□□□□□ -1.5
PDB1YBR221C LAG2Q92325 660 aa5.68□□□□□ -1.5
PDB1YBR221C CKA2P19454 339 aa5.67□□□□□ -1.5
PDB1YBR221C MCM4P30665 933 aaKnown RBP5.67□□□□□ -1.5
PDB1YBR221C RTG1P32607 177 aa5.67□□□□□ -1.5
PDB1YBR221C KKQ8P36004 724 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms