RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 PLIN4Q96Q06 1357 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 PDHBP11177 359 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 ZSCAN29Q8IWY8 852 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
TARDBP-230ENST00000639083 DNAJC18Q9H819 358 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 FAM13BQ9NYF5 915 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 CCDC39Q9UFE4 941 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
TARDBP-230ENST00000639083 STXBP3O00186 592 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 TTLL1O95922 423 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 ZRSR1Q15695 479 aaKnown RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 EHD4Q9H223 541 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
TARDBP-230ENST00000639083 RAD17O75943 681 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 PTGDRQ13258 359 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 PNOCQ13519 176 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 DPCR1Q3MIW9 517 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 CFAP100Q494V2 611 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
TARDBP-230ENST00000639083 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 M0R2N6 131 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 MCM7P33993 719 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 ATP2B2Q01814 1243 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
TARDBP-230ENST00000639083 CEP57L1Q8IYX8 460 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 PDILTQ8N807 584 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 RRP36Q96EU6 259 aaKnown RBP12.33□□□□□ -0.44
TARDBP-230ENST00000639083 PIGSQ96S52 555 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 PSMD1Q99460 953 aa12.33□□□□□ -0.44
TARDBP-230ENST00000639083 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
TARDBP-230ENST00000639083 BECN2A8MW95 431 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 GOLGA6L19H0YKK7 550 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 FOXN1O15353 648 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 BMP15O95972 392 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 CCDC148Q8NFR7 591 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 EPSTI1Q96J88 318 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 NAPAP54920 295 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 NLRP12P59046 1061 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 ATP2C1P98194 919 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 NAT10Q9H0A0 1025 aaKnown RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 RIOX1Q9H6W3 641 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 SEC63Q9UGP8 760 aaKnown RBP12.32□□□□□ -0.44
TARDBP-230ENST00000639083 SERTAD1Q9UHV2 236 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
TARDBP-230ENST00000639083 CCDC194A0A1B0GVG4 234 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 VWA3AA6NCI4 1184 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 PSMD14O00487 310 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 MSNP26038 577 aaKnown RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 CERKLQ49MI3 558 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 GALNT17Q6IS24 598 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 CLCN1P35523 988 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 DAGLBQ8NCG7 672 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ZNF830Q96NB3 372 aaPredicted RBP12.31□□□□□ -0.44
TARDBP-230ENST00000639083 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
TARDBP-230ENST00000639083 UTRNP46939 3433 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms