RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 SLFN13Q68D06 897 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 C2orf69Q8N8R5 385 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 NSUN7Q8NE18 718 aaKnown RBP9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 OTUD5Q96G74 571 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 CHMP5Q9NZZ3 219 aa9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 ORC3Q9UBD5 711 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-217ENST00000623935 STK36Q9NRP7 1315 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 UNCXA6NJT0 531 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 KLRF2D3W0D1 207 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 H3BQV1 296 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 DEXIO95424 95 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 XBP1P17861 261 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 PTPRAP18433 802 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SMARCA1P28370 1054 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 JAG1P78504 1218 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SHROOM1Q2M3G4 852 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 IFFO2Q5TF58 517 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 USP17L2Q6R6M4 530 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 TMTC3Q6ZXV5 915 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SMARCC2Q8TAQ2 1214 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 LPAR1Q92633 364 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 RNF26Q9BY78 433 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SEC63Q9UGP8 760 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 FZD1Q9UP38 647 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 ZHX2Q9Y6X8 837 aa9.9□□□□□ -0.82
SOX9-AS1-217ENST00000623935 SSC5DA1L4H1 1573 aa9.9□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PALM3A6NDB9 673 aaPredicted RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 C19orf81C9J6K1 198 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 JAK2O60674 1132 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 GOLGA8HP0CJ92 632 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SNHG28P0DPA3 235 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 BMP3P12645 472 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ECE1P42892 770 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ZNF543Q08ER8 600 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ST3GAL1Q11201 340 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 VGLL4Q14135 290 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 DLK2Q6UY11 383 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SIAH1Q8IUQ4 282 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 RBM46Q8TBY0 533 aaKnown RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PHKBQ93100 1093 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 WDR18Q9BV38 432 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 KIAA1683Q9H0B3 1180 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 VCPKMTQ9H867 229 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 FAM217BQ9NTX9 383 aaPredicted RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 MAD2L2Q9UI95 211 aa9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 FRMPD2Q68DX3 1309 aaPredicted RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 WDR33Q9C0J8 1336 aaKnown RBP9.89□□□□□ -0.83
SOX9-AS1-217ENST00000623935 TRAF5O00463 557 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 CELF2O95319 508 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PLEKHA8P1O95397 391 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 CTDNEP1O95476 244 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 NDUFB10O96000 172 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SPP2Q13103 211 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ZYXQ15942 572 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 NTRK3Q16288 839 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ERO1BQ86YB8 467 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 CMTR1Q8N1G2 835 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 CHURC1Q8WUH1 139 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SLC10A4Q96EP9 437 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 RRP36Q96EU6 259 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SPZ1Q9BXG8 430 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 GBA2Q9HCG7 927 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 TMOD4Q9NZQ9 345 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 A0A1W2PRG0 241 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 VPS37CA5D8V6 355 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 TRIM75PA6NK02 468 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 STX6O43752 255 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PPFIA3O75145 1194 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SYT1P21579 422 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 STAT2P52630 851 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 BACE1P56817 501 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 PPATQ06203 517 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 MTMR2Q13614 643 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 KCTD1Q719H9 257 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 CCDC84Q86UT8 332 aaPredicted RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SPICE1Q8N0Z3 855 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 STAG2Q8N3U4 1231 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SRBD1Q8N5C6 995 aaKnown RBP9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ALG1Q9BT22 464 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 ELP3Q9H9T3 547 aa9.88□□□□□ -0.83
SOX9-AS1-217ENST00000623935 VAT1LQ9HCJ6 419 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms