RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 MRFAP1L1Q96HT8 127 aa24.31■■□□□ 1.48
LIME1-210ENST00000621325 ACTN4O43707 911 aaKnown RBP24.31■■□□□ 1.48
LIME1-210ENST00000621325 HEATR3Q7Z4Q2 680 aa24.31■■□□□ 1.48
LIME1-210ENST00000621325 BLIDQ8IZY5 108 aa24.31■■□□□ 1.48
LIME1-210ENST00000621325 FOCADQ5VW36 1801 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 GABPAQ06546 454 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 NOLC1Q14978 699 aaKnown RBP eCLIP24.3■■□□□ 1.48
LIME1-210ENST00000621325 POSTNQ15063 836 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 CDC42EP5Q6NZY7 148 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 MORC2Q9Y6X9 1032 aaPredicted RBP24.3■■□□□ 1.48
LIME1-210ENST00000621325 CLEC10AQ8IUN9 316 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 KIAA1524Q8TCG1 905 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 PCDHA4Q9UN74 947 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 PCDHAC2Q9Y5I4 1007 aa24.3■■□□□ 1.48
LIME1-210ENST00000621325 TNS1Q9HBL0 1735 aaKnown RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 SLURP2P0DP57 97 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 MCM7P33993 719 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 ATP2C1P98194 919 aaPredicted RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 DMTNQ08495 405 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 APOBEC3HQ6NTF7 200 aaKnown RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 SYMPKQ92797 1274 aaKnown RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 SH3GLB2Q9NR46 395 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 VWA3AA6NCI4 1184 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 H0YIN7 160 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 TOP1P11387 765 aaKnown RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 CALML3P27482 149 aa24.29■■□□□ 1.48
LIME1-210ENST00000621325 EZH2Q15910 746 aaKnown RBP24.29■■□□□ 1.48
LIME1-210ENST00000621325 AKR1B1P15121 316 aa24.28■■□□□ 1.48
LIME1-210ENST00000621325 NFIAQ12857 509 aa24.28■■□□□ 1.48
LIME1-210ENST00000621325 ELOA2Q8IYF1 753 aaPredicted RBP24.28■■□□□ 1.48
LIME1-210ENST00000621325 FERMT2Q96AC1 680 aa24.28■■□□□ 1.48
LIME1-210ENST00000621325 DHX58Q96C10 678 aa24.28■■□□□ 1.48
LIME1-210ENST00000621325 HSD3B7Q9H2F3 369 aa24.28■■□□□ 1.48
LIME1-210ENST00000621325 STXBP3O00186 592 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 BMP15O95972 392 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 PARP1P09874 1014 aaKnown RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 ARID5BQ14865 1188 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 PAXIP1Q6ZW49 1069 aaPredicted RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 TEKT1Q969V4 418 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 MAN1B1Q9UKM7 699 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 QSER1Q2KHR3 1735 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 USP17L5A8MUK1 530 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 LMOD1P29536 600 aaPredicted RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 NOVP48745 357 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 EIF6P56537 245 aaKnown RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 IL17AQ16552 155 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 KIAA0825Q8IV33 1275 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 CACTINQ8WUQ7 758 aaKnown RBP24.27■■□□□ 1.48
LIME1-210ENST00000621325 BARHL2Q9NY43 387 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 SLX4Q8IY92 1834 aa24.27■■□□□ 1.48
LIME1-210ENST00000621325 M0R2N6 131 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 TRAPPC10P48553 1259 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 HHIPL2Q6UWX4 724 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 PODNQ7Z5L7 613 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 HOMER1Q86YM7 354 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 IPO4Q8TEX9 1081 aaKnown RBP24.26■■□□□ 1.47
LIME1-210ENST00000621325 R3HCC1Q9Y3T6 440 aaKnown RBP24.26■■□□□ 1.47
LIME1-210ENST00000621325 UTP14CQ5TAP6 766 aaKnown RBP24.26■■□□□ 1.47
LIME1-210ENST00000621325 ZFPM1Q8IX07 1006 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 PCDHA6Q9UN73 950 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 PCDHA8Q9Y5H6 950 aa24.26■■□□□ 1.47
LIME1-210ENST00000621325 ATP1A3P13637 1013 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 CRKP46108 304 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 SLC15A2Q16348 729 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 STYK1Q6J9G0 422 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 LRRC47Q8N1G4 583 aaKnown RBP24.25■■□□□ 1.47
LIME1-210ENST00000621325 SPZ1Q9BXG8 430 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 OSBPL5Q9H0X9 879 aaPredicted RBP24.25■■□□□ 1.47
LIME1-210ENST00000621325 VAT1LQ9HCJ6 419 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 MTMR4Q9NYA4 1195 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 RGS17Q9UGC6 210 aaPredicted RBP24.25■■□□□ 1.47
LIME1-210ENST00000621325 HOOK1Q9UJC3 728 aaKnown RBP24.25■■□□□ 1.47
LIME1-210ENST00000621325 SARSP49591 514 aaKnown RBP24.25■■□□□ 1.47
LIME1-210ENST00000621325 CACNB3P54284 484 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 LZTS2Q9BRK4 669 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 UBA5Q9GZZ9 404 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 IFNKQ9P0W0 207 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 SERPINB13Q9UIV8 391 aa24.25■■□□□ 1.47
LIME1-210ENST00000621325 SMTNL1A8MU46 457 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 IKBKBO14920 756 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 FILIP1Q7Z7B0 1213 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 XPO4Q9C0E2 1151 aaKnown RBP24.24■■□□□ 1.47
LIME1-210ENST00000621325 SPTLC3Q9NUV7 552 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 FRMPD2Q68DX3 1309 aaPredicted RBP24.24■■□□□ 1.47
LIME1-210ENST00000621325 CASP1P29466 404 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 NT5DC1Q5TFE4 455 aa24.24■■□□□ 1.47
LIME1-210ENST00000621325 ECE2O60344 883 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 SMC2O95347 1197 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 SHMT1P34896 483 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 AFMP43652 599 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 C4orf32Q8N8J7 132 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 SMARCE1Q969G3 411 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 SCN9AQ15858 1988 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 PLIN4Q96Q06 1357 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 PDHBP11177 359 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 MYL5Q02045 173 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 POTEAQ6S8J7 498 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 CCDC148Q8NFR7 591 aa24.23■■□□□ 1.47
LIME1-210ENST00000621325 PIGSQ96S52 555 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms