RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 UBN1Q9NPG3 1134 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 MOSPD1Q9UJG1 213 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 SESN3P58005 492 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 GBP6Q6ZN66 633 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 MICAL1Q8TDZ2 1067 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 HDAC11Q96DB2 347 aa17.06■□□□□ 0.32
TNXB-209ENST00000613214 KCNA6P17658 529 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
TNXB-209ENST00000613214 PLEKHM2Q8IWE5 1019 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 NOC2LQ9Y3T9 749 aaKnown RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 NPATQ14207 1427 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 BCRP11274 1271 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SNAP25P60880 206 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 MAD1L1Q9Y6D9 718 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 EYA2O00167 538 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 FANCCQ00597 558 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SLC9C1Q4G0N8 1177 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 OTUD6AQ7L8S5 288 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 XPAP23025 273 aaPredicted RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 SFMBT2Q5VUG0 894 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
TNXB-209ENST00000613214 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
TNXB-209ENST00000613214 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
TNXB-209ENST00000613214 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 LRFN2Q9ULH4 789 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 TMOD1P28289 359 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 JADE1Q6IE81 842 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 BCAMP50895 628 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 DPH5Q9H2P9 285 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
TNXB-209ENST00000613214 TRIM68Q6AZZ1 485 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 TRIM37O94972 964 aa17.04■□□□□ 0.32
TNXB-209ENST00000613214 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
TNXB-209ENST00000613214 ECE1P42892 770 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 BAG6P46379 1132 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 VCX3BQ9H321 246 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 P4HA1P13674 534 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 MARK3P27448 753 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 RAPH1Q70E73 1250 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 DHX29Q7Z478 1369 aaKnown RBP17.03■□□□□ 0.32
TNXB-209ENST00000613214 MTRQ99707 1265 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 ABCC1P33527 1531 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 SMIM24O75264 130 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
TNXB-209ENST00000613214 NDUFAB1O14561 156 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 CAVIN2O95810 425 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 MX2P20592 715 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 GBP1P32455 592 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 ZBTB33Q86T24 672 aa17.03■□□□□ 0.32
TNXB-209ENST00000613214 SPDYE1Q8NFV5 336 aaPredicted RBP17.03■□□□□ 0.32
TNXB-209ENST00000613214 TSR3Q9UJK0 312 aaKnown RBP17.03■□□□□ 0.32
TNXB-209ENST00000613214 ZNF202O95125 648 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 TNNC2P02585 160 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
TNXB-209ENST00000613214 C19orf44Q9H6X5 657 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
TNXB-209ENST00000613214 MAGEA1P43355 309 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 POSTNQ15063 836 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 RSRC1Q96IZ7 334 aaKnown RBP17.02■□□□□ 0.32
TNXB-209ENST00000613214 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
TNXB-209ENST00000613214 KCTD1Q719H9 257 aa17.02■□□□□ 0.31
TNXB-209ENST00000613214 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.31
TNXB-209ENST00000613214 RAB20Q9NX57 234 aa17.02■□□□□ 0.31
TNXB-209ENST00000613214 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.31
TNXB-209ENST00000613214 ADCY8P40145 1251 aa17.02■□□□□ 0.31
TNXB-209ENST00000613214 MAST3O60307 1309 aa17.02■□□□□ 0.31
TNXB-209ENST00000613214 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
TNXB-209ENST00000613214 ACRBPQ8NEB7 543 aa17.01■□□□□ 0.31
TNXB-209ENST00000613214 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
TNXB-209ENST00000613214 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
TNXB-209ENST00000613214 CACNA2D3Q8IZS8 1091 aa17.01■□□□□ 0.31
TNXB-209ENST00000613214 PDZD8Q8NEN9 1154 aa17.01■□□□□ 0.31
TNXB-209ENST00000613214 SNX14Q9Y5W7 946 aa17.01■□□□□ 0.31
TNXB-209ENST00000613214 DENND2CQ68D51 928 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms