RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 NTRK3Q16288 839 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 USP17L2Q6R6M4 530 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.41
DDX39A-211ENST00000590239 SLC10A4Q96EP9 437 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 PCNTO95613 3336 aa17.64■□□□□ 0.41
DDX39A-211ENST00000590239 PHIPQ8WWQ0 1821 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 KLRF2D3W0D1 207 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 APLP1P51693 650 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
DDX39A-211ENST00000590239 PPIL2Q13356 520 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 MTMR2Q13614 643 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 COL13A1Q5TAT6 717 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-211ENST00000590239 SMARCC2Q8TAQ2 1214 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
DDX39A-211ENST00000590239 SMC3Q9UQE7 1217 aa17.63■□□□□ 0.41
DDX39A-211ENST00000590239 TRIM75PA6NK02 468 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 CXCL11O14625 94 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 RAD21O60216 631 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 BMP3P12645 472 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 FUT2Q10981 343 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 KIAA1755Q5JYT7 1200 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 STAG2Q8N3U4 1231 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 SPZ1Q9BXG8 430 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 EMILIN3Q9NT22 766 aa17.62■□□□□ 0.41
DDX39A-211ENST00000590239 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 WDR46O15213 610 aaKnown RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 ZYXQ15942 572 aaKnown RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 RASGRP2Q7LDG7 609 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 SPICE1Q8N0Z3 855 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 SRBD1Q8N5C6 995 aaKnown RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 OTUD5Q96G74 571 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 GPCPD1Q9NPB8 672 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 KCNH4Q9UQ05 1017 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 FRMPD2Q68DX3 1309 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-211ENST00000590239 STK36Q9NRP7 1315 aa17.61■□□□□ 0.41
DDX39A-211ENST00000590239 IRF6O14896 467 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 JAK2O60674 1132 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 PLA2G6O60733 806 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-211ENST00000590239 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
DDX39A-211ENST00000590239 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 KCTD1Q719H9 257 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 NUP88Q99567 741 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-211ENST00000590239 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
DDX39A-211ENST00000590239 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 A0A0G2JLL6 359 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 PRPF3O43395 683 aaKnown RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 GJB2P29033 226 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 HMGCS2P54868 508 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 HUNKP57058 714 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 AKAP17AQ02040 695 aaKnown RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 FAM83BQ5T0W9 1011 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 PRRT2Q7Z6L0 340 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 CHURC1Q8WUH1 139 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 PHKBQ93100 1093 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 RIOX1Q9H6W3 641 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-211ENST00000590239 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
DDX39A-211ENST00000590239 TMEM232C9JQI7 657 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.4
DDX39A-211ENST00000590239 VCAM1P19320 739 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 TTBK2Q6IQ55 1244 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 FAM160B2Q86V87 743 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 WASF1Q92558 559 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 WNK4Q96J92 1243 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.4
DDX39A-211ENST00000590239 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
DDX39A-211ENST00000590239 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-211ENST00000590239 TMEM88BA6NKF7 163 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 CYTH3O43739 400 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 DEXIO95424 95 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 ZBTB48P10074 688 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-211ENST00000590239 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
DDX39A-211ENST00000590239 PDCP20941 246 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 DDIT3P35638 169 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 GJA5P36382 358 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 STAT2P52630 851 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 SNAPC2Q13487 334 aa17.57■□□□□ 0.4
DDX39A-211ENST00000590239 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms