RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 PROSER3Q2NL68 480 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 BTLAQ7Z6A9 289 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 DTWD1Q8N5C7 304 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 CLUAP1Q96AJ1 413 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 FAM89AQ96GI7 184 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 GSX2Q9BZM3 304 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 CHL1O00533 1208 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 IRS4O14654 1257 aaPredicted RBP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 LZTS3O60299 673 aaPredicted RBP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 TRPA1O75762 1119 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 VIL1P09327 827 aaKnown RBP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 FSTP19883 344 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 IRAK1P51617 712 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 FKBP1BP68106 108 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 GPSM2P81274 684 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 WDR43Q15061 677 aaKnown RBP eCLIP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 GRIK5Q16478 980 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 KIF4BQ2VIQ3 1234 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 CCDC152Q4G0S7 254 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 IGF2-ASQ6U949 168 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 AGBL3Q8NEM8 1001 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 TBC1D16Q8TBP0 767 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 CELF1Q92879 486 aaKnown RBP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 ISCA1Q9BUE6 129 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 EFCC1Q9HA90 598 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 RNF186Q9NXI6 227 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 CHPF2Q9P2E5 772 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 POLLQ9UGP5 575 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.16□□□□□ -1.26
DNMT1-220ENST00000589351 CASP8AP2Q9UKL3 1982 aa7.16□□□□□ -1.26
DNMT1-220ENST00000589351 DDX58O95786 925 aaKnown RBP7.15□□□□□ -1.26
DNMT1-220ENST00000589351 NF2P35240 595 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 CD97P48960 835 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 MMP14P50281 582 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 PLAURQ03405 335 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 CALD1Q05682 793 aaKnown RBP7.15□□□□□ -1.26
DNMT1-220ENST00000589351 FLIIQ13045 1269 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 PKN2Q16513 984 aaKnown RBP7.15□□□□□ -1.26
DNMT1-220ENST00000589351 CTU1Q7Z7A3 348 aaKnown RBP7.15□□□□□ -1.26
DNMT1-220ENST00000589351 SLC51AQ86UW1 340 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 FAM35AQ86V20 835 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 DEPDC4Q8N2C3 294 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 OGFOD1Q8N543 542 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 ZBTB38Q8NAP3 1195 aaPredicted RBP7.15□□□□□ -1.26
DNMT1-220ENST00000589351 RUNDC1Q96C34 613 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 HDAC9Q9UKV0 1011 aa7.15□□□□□ -1.26
DNMT1-220ENST00000589351 SHTN1A0MZ66 631 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 USP17L3A6NCW0 530 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 USP17L4A6NCW7 530 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 FAM155AB1AL88 458 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-220ENST00000589351 ADM5C9JUS6 153 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-220ENST00000589351 PDE8AO60658 829 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 UFL1O94874 794 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 CPB1P15086 417 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 TAL1P17542 331 aaPredicted RBP7.14□□□□□ -1.27
DNMT1-220ENST00000589351 NFKB1P19838 968 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 USP17L1Q7RTZ2 530 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 ANKRD18AQ8IVF6 992 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 DZIP1LQ8IYY4 767 aaKnown RBP7.14□□□□□ -1.27
DNMT1-220ENST00000589351 CCDC191Q8NCU4 936 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 PNMA5Q96PV4 448 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 CSRNP1Q96S65 589 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 LPIN3Q9BQK8 851 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 KCNQ5Q9NR82 932 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 GGA3Q9NZ52 723 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 KIAA1024Q9UPX6 916 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 CHMP3Q9Y3E7 222 aa7.14□□□□□ -1.27
DNMT1-220ENST00000589351 AKAP11Q9UKA4 1901 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 LAMB2P55268 1798 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 XDHP47989 1333 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 PITPNM2Q9BZ72 1349 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 DEAF1O75398 565 aaPredicted RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 MED26O95402 600 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 GNAI1P63096 354 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 ANGEL2Q5VTE6 544 aaKnown RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 CCDC146Q8IYE0 955 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 CDCA5Q96FF9 252 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 CDC5LQ99459 802 aaKnown RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 MYOZ2Q9NPC6 264 aa7.13□□□□□ -1.27
DNMT1-220ENST00000589351 CWC25Q9NXE8 425 aaPredicted RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 OAS3Q9Y6K5 1087 aaKnown RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 ARID1BQ8NFD5 2236 aaPredicted RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 POLR2AP24928 1970 aaKnown RBP7.13□□□□□ -1.27
DNMT1-220ENST00000589351 MYO3BQ8WXR4 1341 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 E9PSI1 815 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 ALX3O95076 343 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 EGFRP00533 1210 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 PCCAP05165 728 aaPredicted RBP7.12□□□□□ -1.27
DNMT1-220ENST00000589351 SOX10P56693 466 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
DNMT1-220ENST00000589351 NEXNQ0ZGT2 675 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 SREBF2Q12772 1141 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 CCINQ13939 588 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 KRT24Q2M2I5 525 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 PERM1Q5SV97 790 aa7.12□□□□□ -1.27
DNMT1-220ENST00000589351 DLK2Q6UY11 383 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms