RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCDC186Q7Z3E2 898 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 FAM177A1Q8N128 213 aaPredicted RBP20.71■□□□□ 0.91
SMPD3-211ENST00000568373 CCDC148Q8NFR7 591 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 BARHL2Q9NY43 387 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 SERTAD1Q9UHV2 236 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 MYH8P13535 1937 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 GOLGB1Q14789 3259 aaKnown RBP20.71■□□□□ 0.91
SMPD3-211ENST00000568373 SMTNL1A8MU46 457 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 FOXN1O15353 648 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 ACTN4O43707 911 aaKnown RBP20.71■□□□□ 0.91
SMPD3-211ENST00000568373 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 GALNT17Q6IS24 598 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 APOBEC3HQ6NTF7 200 aaKnown RBP20.71■□□□□ 0.91
SMPD3-211ENST00000568373 KANK3Q6NY19 840 aa20.71■□□□□ 0.91
SMPD3-211ENST00000568373 IKBKBO14920 756 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 NCAPHQ15003 741 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 RASGRP2Q7LDG7 609 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 PDILTQ8N807 584 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 DAGLBQ8NCG7 672 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 PDGFDQ9GZP0 370 aaPredicted RBP20.7■□□□□ 0.9
SMPD3-211ENST00000568373 OSBPL5Q9H0X9 879 aaPredicted RBP20.7■□□□□ 0.9
SMPD3-211ENST00000568373 NRBP1Q9UHY1 535 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 SERPINB13Q9UIV8 391 aa20.7■□□□□ 0.9
SMPD3-211ENST00000568373 M0R2N6 131 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 STXBP3O00186 592 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 TPM4P67936 248 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 NT5DC1Q5TFE4 455 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 EPSTI1Q96J88 318 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 KCNQ5Q9NR82 932 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 MTMR4Q9NYA4 1195 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 SMARCA1P28370 1054 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 CRKP46108 304 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
SMPD3-211ENST00000568373 STRIP1Q5VSL9 837 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 USP17L2Q6R6M4 530 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 SYMPKQ92797 1274 aaKnown RBP20.69■□□□□ 0.9
SMPD3-211ENST00000568373 CNKSR1Q969H4 720 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 NAP1L5Q96NT1 182 aaPredicted RBP20.69■□□□□ 0.9
SMPD3-211ENST00000568373 MYO3BQ8WXR4 1341 aa20.69■□□□□ 0.9
SMPD3-211ENST00000568373 CHRNA5P30532 468 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 SCN9AQ15858 1988 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 ZDHHC15Q96MV8 337 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 AKR1B1P15121 316 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 MCM7P33993 719 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 NOLC1Q14978 699 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMPD3-211ENST00000568373 KIAA1524Q8TCG1 905 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 MRIQ9BWK5 157 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 PYCARDQ9ULZ3 195 aa20.68■□□□□ 0.9
SMPD3-211ENST00000568373 A0A087X0B3 334 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 IGKV6D-41A0A0C4DH26 115 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 VWA3AA6NCI4 1184 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 ECE2O60344 883 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 PRR29P0C7W0 189 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
SMPD3-211ENST00000568373 DACT2Q5SW24 774 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 CCDC125Q86Z20 511 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 RASGRP4Q8TDF6 673 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 CCDC34Q96HJ3 373 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 CPVLQ9H3G5 476 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 STK32BQ9NY57 414 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
SMPD3-211ENST00000568373 CCDC194A0A1B0GVG4 234 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 BMP6P22004 513 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 CCDC144BQ3MJ40 725 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 DHX58Q96C10 678 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 RRP36Q96EU6 259 aaKnown RBP20.66■□□□□ 0.9
SMPD3-211ENST00000568373 SPTLC3Q9NUV7 552 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 PCDHA6Q9UN73 950 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 PCDHA8Q9Y5H6 950 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 ZNF646O15015 1829 aaPredicted RBP20.66■□□□□ 0.9
SMPD3-211ENST00000568373 USP17L5A8MUK1 530 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 HLA-DOAP06340 250 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 SLFN14P0C7P3 912 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 PDHBP11177 359 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 MYL5Q02045 173 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 NFIAQ12857 509 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 ARL6IP4Q66PJ3 421 aaKnown RBP20.66■□□□□ 0.9
SMPD3-211ENST00000568373 KIAA0825Q8IV33 1275 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
SMPD3-211ENST00000568373 C7orf43Q8WVR3 580 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
SMPD3-211ENST00000568373 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
SMPD3-211ENST00000568373 SHMT1P34896 483 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
SMPD3-211ENST00000568373 GRAMD1CQ8IYS0 662 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 C17orf53Q8N3J3 647 aaPredicted RBP20.65■□□□□ 0.9
SMPD3-211ENST00000568373 TRIML1Q8N9V2 468 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 SPATA20Q8TB22 786 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 ZMYND12Q9H0C1 365 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 C4orf32Q8N8J7 132 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 EHD4Q9H223 541 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 HSD3B7Q9H2F3 369 aa20.65■□□□□ 0.9
SMPD3-211ENST00000568373 SEC63Q9UGP8 760 aaKnown RBP20.65■□□□□ 0.9
SMPD3-211ENST00000568373 TTLL1O95922 423 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 NAPAP54920 295 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 LRMPQ12912 555 aa20.64■□□□□ 0.89
SMPD3-211ENST00000568373 MORC3Q14149 939 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms