RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
TPM1-209ENST00000558072 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 CHURC1Q8WUH1 139 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 SLC10A4Q96EP9 437 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 TMOD4Q9NZQ9 345 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 HPS5Q9UPZ3 1129 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 PALM3A6NDB9 673 aaPredicted RBP14.4□□□□□ -0.1
TPM1-209ENST00000558072 TMEM88BA6NKF7 163 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 PLA2G6O60733 806 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 DTNBO60941 627 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 FDX1P10109 184 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 PDHBP11177 359 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 BMP3P12645 472 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 BACE1P56817 501 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 KIAA1755Q5JYT7 1200 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 SAPCD2Q86UD0 394 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 FAM160B2Q86V87 743 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 OPTNQ96CV9 577 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
TPM1-209ENST00000558072 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
TPM1-209ENST00000558072 TLL2Q9Y6L7 1015 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 ZHX2Q9Y6X8 837 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
TPM1-209ENST00000558072 SPDYE5A6NIY4 337 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 TRIM75PA6NK02 468 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 KLRF2D3W0D1 207 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 WDR46O15213 610 aaKnown RBP14.39□□□□□ -0.11
TPM1-209ENST00000558072 RAD21O60216 631 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 PPIL2Q13356 520 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 CCDC96Q2M329 555 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 CYP4F22Q6NT55 531 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 PAXIP1Q6ZW49 1069 aaPredicted RBP14.39□□□□□ -0.11
TPM1-209ENST00000558072 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 RASAL3Q86YV0 1011 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 NECAB1Q8N987 351 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 ZIC5Q96T25 663 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 MYL10Q9BUA6 226 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
TPM1-209ENST00000558072 LOC285556D6RIA3 1793 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 hCG_1984214I3L0E3 225 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 DEXIO95424 95 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 LARGE1O95461 756 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 NDUFB10O96000 172 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 ADD1P35611 737 aaKnown RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 APLP1P51693 650 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 NUCB2P80303 420 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 SPP2Q13103 211 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 PABPC4Q13310 644 aaKnown RBP eCLIP14.38□□□□□ -0.117e-11■□□□□ 8
TPM1-209ENST00000558072 MTMR2Q13614 643 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 TRIM29Q14134 588 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 SH3D19Q5HYK7 790 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 ZNF713Q8N859 430 aaPredicted RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 WNK4Q96J92 1243 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 SEC63Q9UGP8 760 aaKnown RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 ISY1Q9ULR0 285 aaKnown RBP14.38□□□□□ -0.11
TPM1-209ENST00000558072 AFG3L2Q9Y4W6 797 aa14.38□□□□□ -0.11
TPM1-209ENST00000558072 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
TPM1-209ENST00000558072 PRPF3O43395 683 aaKnown RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 ZBTB48P10074 688 aaPredicted RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 RXRAP19793 462 aa14.37□□□□□ -0.11
TPM1-209ENST00000558072 STAT2P52630 851 aa14.37□□□□□ -0.11
TPM1-209ENST00000558072 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
TPM1-209ENST00000558072 CCDC144CPQ8IYA2 1237 aa14.37□□□□□ -0.11
TPM1-209ENST00000558072 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 ORC3Q9UBD5 711 aaPredicted RBP14.37□□□□□ -0.11
TPM1-209ENST00000558072 IRF6O14896 467 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 AOC2O75106 756 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 GJB2P29033 226 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 CDC27P30260 824 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 ZNF157P51786 506 aaPredicted RBP14.36□□□□□ -0.11
TPM1-209ENST00000558072 IKQ13123 557 aaPredicted RBP14.36□□□□□ -0.11
TPM1-209ENST00000558072 SNAPC2Q13487 334 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 RGMBQ6NW40 437 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 BTNL9Q6UXG8 535 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 SLC26A6Q9BXS9 759 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
TPM1-209ENST00000558072 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
TPM1-209ENST00000558072 KCNH4Q9UQ05 1017 aa14.36□□□□□ -0.11
TPM1-209ENST00000558072 FAM155AB1AL88 458 aaPredicted RBP14.35□□□□□ -0.11
TPM1-209ENST00000558072 GTF2A2P52657 109 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 HMGCS2P54868 508 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 NTRK3Q16288 839 aa14.35□□□□□ -0.11
TPM1-209ENST00000558072 LARP1BQ659C4 914 aaKnown RBP14.35□□□□□ -0.11
TPM1-209ENST00000558072 PRPF38AQ8NAV1 312 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms