RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-225	ENST00000550715	PPFIA3	O75145	1194 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	BBOX1	O75936	387 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	CD33	P20138	364 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	GPT	P24298	496 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	LDLRAD1	Q5T700	205 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	FZD1	Q9UP38	647 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	EYS	Q5T1H1	3165 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	ABCC4	O15439	1325 aa		10.05	□□□□□ -0.8
LETMD1-225	ENST00000550715	MANSC4	A6NHS7	340 aa	Predicted RBP	10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	TNFRSF21	O75509	655 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	VIL1	P09327	827 aa	Known RBP	10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	HMOX1	P09601	288 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	LRIT3	Q3SXY7	679 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	MRRF	Q96E11	262 aa	Known RBP	10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	GUCD1	Q96NT3	240 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	PTPN18	Q99952	460 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	GDF15	Q99988	308 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	ELP3	Q9H9T3	547 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	RNF19A	Q9NV58	838 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	NDFIP2	Q9NV92	336 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	RPTOR	Q8N122	1335 aa		10.04	□□□□□ -0.8
LETMD1-225	ENST00000550715	EIF1AY	O14602	144 aa	Known RBP	10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	SASH3	O75995	380 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	BMP8B	P34820	402 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	ZNF280A	P59817	542 aa	Predicted RBP	10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	ATP2B2	Q01814	1243 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	TEF	Q10587	303 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	ENOX2	Q16206	610 aa	Known RBP	10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	PDE12	Q6L8Q7	609 aa	Known RBP	10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	NGEF	Q8N5V2	710 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	UBN2	Q6ZU65	1347 aa		10.03	□□□□□ -0.8
LETMD1-225	ENST00000550715	KDM3B	Q7LBC6	1761 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715		E9PSI1	815 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	ECE2	O60344	883 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	VWA5B2	Q8N398	1253 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	SNX29	Q8TEQ0	813 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	CLMN	Q96JQ2	1002 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	FAM161B	Q96MY7	647 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	MARK1	Q9P0L2	795 aa		10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.02	□□□□□ -0.81
LETMD1-225	ENST00000550715	PIEZO1	Q92508	2521 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	PHACTR2	O75167	634 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	NTSR2	O95665	410 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	GJA8	P48165	433 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	CCIN	Q13939	588 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	NBPF9	Q3BBW0	867 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	XKR5	Q6UX68	686 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	ARMC9	Q7Z3E5	817 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	DUSP9	Q99956	384 aa	Known RBP	10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	ARHGAP39	Q9C0H5	1083 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	MYOZ2	Q9NPC6	264 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	POLL	Q9UGP5	575 aa		10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	ANGEL1	Q9UNK9	670 aa	Known RBP	10.01	□□□□□ -0.81
LETMD1-225	ENST00000550715	LAMA2	P24043	3122 aa	Known RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	TMEM265	A0A087WTH1	108 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	CPNE3	O75131	537 aa	Known RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	PRPF40A	O75400	957 aa	Known RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	POLR3D	P05423	398 aa	Predicted RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	NFKB1	P19838	968 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	TARS	P26639	723 aa	Known RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	SPEM2	Q0P670	501 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	MAP3K12	Q12852	859 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	SLC10A5	Q5PT55	438 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	SNX27	Q96L92	541 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	SLC30A3	Q99726	388 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	GSX2	Q9BZM3	304 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	ABI2	Q9NYB9	513 aa	Predicted RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	CNTN3	Q9P232	1028 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	NSFL1C	Q9UNZ2	370 aa	Known RBP	10	□□□□□ -0.81
LETMD1-225	ENST00000550715	CACNA1A	O00555	2505 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	DUOX1	Q9NRD9	1551 aa		10	□□□□□ -0.81
LETMD1-225	ENST00000550715	BTBD11	A6QL63	1104 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	ERVV-1	B6SEH8	477 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	CYP2E1	P05181	493 aa	Predicted RBP	9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	NEFL	P07196	543 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	GJB1	P08034	283 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	SNRPA1	P09661	255 aa	Known RBP	9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	FGFR3	P22607	806 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	NF2	P35240	595 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	LAMC2	Q13753	1193 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	TTLL7	Q6ZT98	887 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	ZNF34	Q8IZ26	560 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	C1orf127	Q8N9H9	656 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	GMCL1	Q96IK5	515 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	WNK4	Q96J92	1243 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	PNMA5	Q96PV4	448 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	GML	Q99445	158 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	CHRD	Q9H2X0	955 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	PARP2	Q9UGN5	583 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	TAF1	P21675	1872 aa		9.99	□□□□□ -0.81
LETMD1-225	ENST00000550715	SCN9A	Q15858	1988 aa		9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	EREG	O14944	169 aa		9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	FARP2	O94887	1054 aa	Predicted RBP	9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	ZBTB48	P10074	688 aa	Predicted RBP	9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	RARA	P10276	462 aa		9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	CCL5	P13501	91 aa		9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	ARHGEF6	Q15052	776 aa		9.98	□□□□□ -0.81
LETMD1-225	ENST00000550715	OTUD7B	Q6GQQ9	843 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms