RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 USP14P54578 494 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 TRAF1Q13077 416 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 GRM4Q14833 912 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 SCYL3Q8IZE3 742 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 SMARCC2Q8TAQ2 1214 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 DCAF4Q8WV16 495 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 FEZ1Q99689 392 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
LDHA-216ENST00000538451 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
LDHA-216ENST00000538451 STK36Q9NRP7 1315 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 RASSF10A6NK89 507 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 CELF2O95319 508 aaKnown RBP11.7□□□□□ -0.54
LDHA-216ENST00000538451 DEXIO95424 95 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 ADD1P35611 737 aaKnown RBP11.7□□□□□ -0.54
LDHA-216ENST00000538451 SLC1A4P43007 532 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 FAM177A1Q8N128 213 aaPredicted RBP11.7□□□□□ -0.54
LDHA-216ENST00000538451 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
LDHA-216ENST00000538451 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
LDHA-216ENST00000538451 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
LDHA-216ENST00000538451 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 STX6O43752 255 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
LDHA-216ENST00000538451 RXRAP19793 462 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 FKBP1BP68106 108 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHA-216ENST00000538451 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDHA-216ENST00000538451 CCDC96Q2M329 555 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 NOL9Q5SY16 702 aaKnown RBP11.69□□□□□ -0.54
LDHA-216ENST00000538451 CST9Q5W186 159 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 ANKRD13AQ8IZ07 590 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
LDHA-216ENST00000538451 LPAR1Q92633 364 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 GMCL1Q96IK5 515 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 ZNF408Q9H9D4 720 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 SCAF8Q9UPN6 1271 aaKnown RBP11.69□□□□□ -0.54
LDHA-216ENST00000538451 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
LDHA-216ENST00000538451 PALM3A6NDB9 673 aaPredicted RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 F5H6K3 240 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 hCG_1984214I3L0E3 225 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 PDHBP11177 359 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 CDC27P30260 824 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 ECE1P42892 770 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 KLRC3Q07444 240 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 GNL2Q13823 731 aaKnown RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 ZNF713Q8N859 430 aaPredicted RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 CCDC12Q8WUD4 166 aaPredicted RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 CHURC1Q8WUH1 139 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 RRP36Q96EU6 259 aaKnown RBP11.68□□□□□ -0.54
LDHA-216ENST00000538451 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 TLL2Q9Y6L7 1015 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 SIPA1L1O43166 1804 aa11.68□□□□□ -0.54
LDHA-216ENST00000538451 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
LDHA-216ENST00000538451 PPP1R37O75864 691 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 SNHG28P0DPA3 235 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 BMP3P12645 472 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 SYT1P21579 422 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 VEGFBP49765 207 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 C2orf69Q8N8R5 385 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 ZNF280CQ8ND82 737 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.545e-17■□□□□ 9.6
LDHA-216ENST00000538451 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 KIAA1683Q9H0B3 1180 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
LDHA-216ENST00000538451 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 TMOD4Q9NZQ9 345 aa11.67□□□□□ -0.54
LDHA-216ENST00000538451 MAD2L2Q9UI95 211 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms