RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 CWC25Q9NXE8 425 aaPredicted RBP6.56□□□□□ -1.36
CHD4-206ENST00000536999 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD4-206ENST00000536999 MYO6Q9UM54 1294 aa6.56□□□□□ -1.36
CHD4-206ENST00000536999 JRKLQ9Y4A0 524 aa6.56□□□□□ -1.36
CHD4-206ENST00000536999 NFE2L3Q9Y4A8 694 aa6.56□□□□□ -1.36
CHD4-206ENST00000536999 SRPRBQ9Y5M8 271 aaKnown RBP6.56□□□□□ -1.36
CHD4-206ENST00000536999 LTBP3Q9NS15 1303 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 A0A087WZG4 1122 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 A0A1W2PQC6 194 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 H7C1W4 665 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 TRAF5O00463 557 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 CLGNO14967 610 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 PPFIA3O75145 1194 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 ZPR1O75312 459 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 IFNAR1P17181 557 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 PTPREP23469 700 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 GUCY2CP25092 1073 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 MNX1P50219 401 aaPredicted RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 CCT2P78371 535 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 TFCP2Q12800 502 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NOGQ13253 232 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 TRIM28Q13263 835 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 NNTQ13423 1086 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 MORC3Q14149 939 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 CASP8Q14790 479 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 UBE3CQ15386 1083 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 CCDC57Q2TAC2 916 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NBPF6Q5VWK0 638 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 CST9Q5W186 159 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 MMS22LQ6ZRQ5 1243 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 YTHDF3Q7Z739 585 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 SAPCD2Q86UD0 394 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 IFNLR1Q8IU57 520 aaPredicted RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 NOSTRINQ8IVI9 506 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 IFNL2Q8IZJ0 200 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 IGSF22Q8N9C0 903 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 TC2NQ8N9U0 490 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 FAM76AQ8TAV0 307 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 SPATA20Q8TB22 786 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 STAG1Q8WVM7 1258 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 JARID2Q92833 1246 aaPredicted RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 KIFC2Q96AC6 838 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NBPF4Q96M43 638 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NEUROD6Q96NK8 337 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NCAPGQ9BPX3 1015 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 SIL1Q9H173 461 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NUCKS1Q9H1E3 243 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 SLC52A2Q9HAB3 445 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 A1CFQ9NQ94 594 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 VPS18Q9P253 973 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 MAGEC2Q9UBF1 373 aaPredicted RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 PA2G4Q9UQ80 394 aaKnown RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 COLQQ9Y215 455 aaPredicted RBP6.55□□□□□ -1.36
CHD4-206ENST00000536999 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 SLC12A7Q9Y666 1083 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 CLIC4Q9Y696 253 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 NID2Q14112 1375 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 ITGB4P16144 1822 aa6.55□□□□□ -1.36
CHD4-206ENST00000536999 DICER1Q9UPY3 1922 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 ZNF541Q9H0D2 1346 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 GOLGA6L7A0A1B0GV03 622 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 HAX1O00165 279 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 PSMD14O00487 310 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 ZEB2O60315 1214 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 CELF2O95319 508 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 POLR3DP05423 398 aaPredicted RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 IGKV5-2P06315 115 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 EPB41P11171 864 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 EEF1GP26641 437 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 RDXP35241 583 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 PAFAH1B1P43034 410 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 RFX5P48382 616 aaPredicted RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 CDK17Q00537 523 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 MCM6Q14566 821 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 ARID5BQ14865 1188 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 CLUL1Q15846 466 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 HSP90AB3PQ58FF7 597 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 ZNF569Q5MCW4 686 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 EMBQ6PCB8 327 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 NFXL1Q6ZNB6 911 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 COPS6Q7L5N1 327 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 CROCCP2Q86T23 111 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 MB21D2Q8IYB1 491 aaPredicted RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 OR8K1Q8NGG5 319 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 COG1Q8WTW3 980 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 ALS2CR12Q96Q35 445 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 MYD88Q99836 296 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.54□□□□□ -1.369e-10■□□□□ 8.5
CHD4-206ENST00000536999 CUEDC2Q9H467 287 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 RBM28Q9NW13 759 aaKnown RBP6.54□□□□□ -1.36
CHD4-206ENST00000536999 SAGE1Q9NXZ1 904 aa6.54□□□□□ -1.36
CHD4-206ENST00000536999 AATFQ9NY61 560 aaKnown RBP eCLIP6.54□□□□□ -1.36
CHD4-206ENST00000536999 RWDD2AQ9UIY3 292 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms