RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 GABPAQ06546 454 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 TTF1Q15361 905 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-209ENST00000530620 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
C11orf54-209ENST00000530620 DNAJC2Q99543 621 aaKnown RBP12.92□□□□□ -0.34
C11orf54-209ENST00000530620 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
C11orf54-209ENST00000530620 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 GOLIM4O00461 696 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 SYN1P17600 705 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 SEPT2Q15019 361 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 WDR78Q5VTH9 848 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 GDF15Q99988 308 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 RPAP3Q9H6T3 665 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
C11orf54-209ENST00000530620 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
C11orf54-209ENST00000530620 MYH4Q9Y623 1939 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 CYP2D6P10635 497 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 CCNA1P78396 465 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
C11orf54-209ENST00000530620 SLC44A5Q8NCS7 719 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
C11orf54-209ENST00000530620 KIF1BPQ96EK5 621 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 FLRT1Q9NZU1 646 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
C11orf54-209ENST00000530620 LAMA3Q16787 3333 aa12.9□□□□□ -0.35
C11orf54-209ENST00000530620 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
C11orf54-209ENST00000530620 COL6A1P12109 1028 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 PTPREP23469 700 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
C11orf54-209ENST00000530620 CLEC10AQ8IUN9 316 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 DCP1AQ9NPI6 582 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-209ENST00000530620 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
C11orf54-209ENST00000530620 SLC15A5A6NIM6 579 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
C11orf54-209ENST00000530620 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
C11orf54-209ENST00000530620 BMP8BP34820 402 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 MAGEA10P43363 369 aaPredicted RBP12.88□□□□□ -0.35
C11orf54-209ENST00000530620 GRB14Q14449 540 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
C11orf54-209ENST00000530620 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 DYNLL2Q96FJ2 89 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
C11orf54-209ENST00000530620 PRKAB2O43741 272 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 HMMRO75330 724 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 MBD4O95243 580 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 CHGBP05060 677 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 HOXC6P09630 235 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 MS4A1P11836 297 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 ADD2P35612 726 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 PSEN2P49810 448 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 LRRC26Q2I0M4 334 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 TANGO6Q9C0B7 1094 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
C11orf54-209ENST00000530620 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 CYP2C19P33261 490 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 TRPV1Q8NER1 839 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
C11orf54-209ENST00000530620 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
C11orf54-209ENST00000530620 COL6A3P12111 3177 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 MAP3K7O43318 606 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 IGHA2P01877 340 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 CYBAP13498 195 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 AKR1B1P15121 316 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 ATP5JP18859 108 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
C11orf54-209ENST00000530620 ATP2B2Q01814 1243 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 ICA1Q05084 483 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 COG2Q14746 738 aa12.85□□□□□ -0.35
C11orf54-209ENST00000530620 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms