RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 NPLOC4Q8TAT6 608 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 DPF3Q92784 378 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 PAWRQ96IZ0 340 aaKnown RBP11.28□□□□□ -0.6
SF3B2-204ENST00000525207 NAPBQ9H115 298 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 FBXO28Q9NVF7 368 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 FLRT1Q9NZU1 646 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-204ENST00000525207 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
SF3B2-204ENST00000525207 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
SF3B2-204ENST00000525207 FOXP2O15409 715 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 PRDM1O75626 825 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 IGHA2P01877 340 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 APPP05067 770 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
SF3B2-204ENST00000525207 FAM83BQ5T0W9 1011 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 MFSD14CQ5VZR4 134 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 NACAP1Q9BZK3 213 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 PFASO15067 1338 aa11.27□□□□□ -0.61
SF3B2-204ENST00000525207 NDUFB10O96000 172 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 CYBAP13498 195 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 PPARAQ07869 468 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 PLS1Q14651 629 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 TMEM132BQ14DG7 1078 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 LHX8Q68G74 356 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 CCDC129Q6ZRS4 1044 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 ABRAQ8N0Z2 381 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 EVI5LQ96CN4 794 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 CEP95Q96GE4 821 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 MROH8Q9H579 483 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-204ENST00000525207 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-204ENST00000525207 NR2E3Q9Y5X4 410 aa11.26□□□□□ -0.61
SF3B2-204ENST00000525207 RANBP2P49792 3224 aaKnown RBP11.26□□□□□ -0.61
SF3B2-204ENST00000525207 VWA5AO00534 786 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 STRNO43815 780 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 RAD21O60216 631 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 EVI5O60447 810 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 CYP2C19P33261 490 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 OLFML2BQ68BL8 750 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
SF3B2-204ENST00000525207 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-204ENST00000525207 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
SF3B2-204ENST00000525207 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 A0A0D9SFI3 127 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 F5H6K3 240 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 MSCO60682 206 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 COBLO75128 1261 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 SLC25A27O95847 323 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 TTLL1O95922 423 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
SF3B2-204ENST00000525207 COL6A1P12109 1028 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 COPB2P35606 906 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.618e-10■■■■□ 26.3
SF3B2-204ENST00000525207 PDE4BQ07343 736 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 VPS53Q5VIR6 699 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
SF3B2-204ENST00000525207 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 TRPV1Q8NER1 839 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 NEDD1Q8NHV4 660 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 DDX20Q9UHI6 824 aaKnown RBP11.24□□□□□ -0.61
SF3B2-204ENST00000525207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.24□□□□□ -0.61
SF3B2-204ENST00000525207 ZMYM6O95789 1325 aa11.24□□□□□ -0.61
SF3B2-204ENST00000525207 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 MCM3APO60318 1980 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 TSPY3P0CV98 308 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 TSPY8P0CW00 308 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 FCER1AP12319 257 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 EXOC6Q8TAG9 804 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 MKL1Q969V6 931 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
SF3B2-204ENST00000525207 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
SF3B2-204ENST00000525207 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
SF3B2-204ENST00000525207 LCTP09848 1927 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms