RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 HOXA10P31260 410 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 AAMPQ13685 434 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 LAMC2Q13753 1193 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 UBAP2LQ14157 1087 aaKnown RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 TNIP1Q15025 636 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 DBN1Q16643 649 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 LDLRAD1Q5T700 205 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 DNAJC14Q6Y2X3 702 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 NPAS3Q8IXF0 933 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 DIS3LQ8TF46 1054 aaKnown RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 U2AF1L4Q8WU68 220 aaKnown RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 PIK3R5Q8WYR1 880 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 ASB2Q96Q27 587 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 UBE2OQ9C0C9 1292 aaKnown RBP6.77□□□□□ -1.33
PABPC1-223ENST00000523636 GGNBP2Q9H3C7 697 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 PCDHGC4Q9Y5F7 938 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 KIF20BQ96Q89 1820 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 ACACBO00763 2458 aa6.77□□□□□ -1.33
PABPC1-223ENST00000523636 GPR179Q6PRD1 2367 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 PSME4Q14997 1843 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 A0A087WZG4 1122 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 FAM86C2PA6NEL3 165 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 NPHP1O15259 732 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 ATXN7O15265 892 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 PPFIA3O75145 1194 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 THBS1P07996 1170 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 HSP90AB1P08238 724 aaKnown RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 FOSL2P15408 326 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 ATCAYQ86WG3 371 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 NANOS1Q8WY41 292 aaKnown RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 CCDC136Q96JN2 1154 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 CEP63Q96MT8 703 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 ASB16Q96NS5 453 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 VPS33BQ9H267 617 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 RIF1Q5UIP0 2472 aaKnown RBP6.76□□□□□ -1.33
PABPC1-223ENST00000523636 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
PABPC1-223ENST00000523636 OTOFQ9HC10 1997 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 ST20-MTHFSA0A0A6YYL1 179 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 MANSC4A6NHS7 340 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 EFSO43281 561 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 PDGFAP04085 211 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 MTHFSP49914 203 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 EHHADHQ08426 723 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 ZNF530Q6P9A1 599 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 NOL8Q76FK4 1167 aaKnown RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 GJD3Q8N144 294 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 EDEM1Q92611 657 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 PAWRQ96IZ0 340 aaKnown RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 DMRTB1Q96MA1 342 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 FAM129BQ96TA1 746 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 LGR6Q9HBX8 967 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 POLIQ9UNA4 740 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 FNDC3AQ9Y2H6 1198 aaKnown RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 DDX60LQ5H9U9 1706 aaKnown RBP6.75□□□□□ -1.33
PABPC1-223ENST00000523636 FRYLO94915 3013 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
PABPC1-223ENST00000523636 LTBP2Q14767 1821 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 SGPL1O95470 568 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 IL6STP40189 918 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 INHBEP58166 350 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 DNM1Q05193 864 aaKnown RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 TNP2Q05952 138 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 TMEM31Q5JXX7 168 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 GPR152Q8TDT2 470 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 ATXN2LQ8WWM7 1075 aaKnown RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 CLMNQ96JQ2 1002 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 RNF208Q9H0X6 261 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 BRD7Q9NPI1 651 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 TERF2IPQ9NYB0 399 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 ATXN7L1Q9ULK2 861 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 PHF24Q9UPV7 400 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 MAP1BP46821 2468 aaKnown RBP6.74□□□□□ -1.33
PABPC1-223ENST00000523636 WASHC2AQ641Q2 1341 aa6.74□□□□□ -1.33
PABPC1-223ENST00000523636 LRRC37AA6NMS7 1700 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
PABPC1-223ENST00000523636 CACNA1HO95180 2353 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 DOCK3Q8IZD9 2030 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 SMG1Q96Q15 3661 aaKnown RBP6.73□□□□□ -1.33
PABPC1-223ENST00000523636 RBM47A0AV96 593 aaKnown RBP6.73□□□□□ -1.33
PABPC1-223ENST00000523636 FAM177BA6PVY3 158 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 A1BGP04217 495 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 XKR5Q6UX68 686 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
PABPC1-223ENST00000523636 WNK4Q96J92 1243 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
PABPC1-223ENST00000523636 KIAA1522Q9P206 1035 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-223ENST00000523636 NXF1Q9UBU9 619 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms