RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CCDC74BQ96LY2 380 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 NOC4LQ9BVI4 516 aaKnown RBP6.36□□□□□ -1.39
HDAC2-208ENST00000520746 KLHL3Q9UH77 587 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 IRAK3Q9Y616 596 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 DNAJA2O60884 412 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 F13A1P00488 732 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 RPL10P27635 214 aaKnown RBP6.35□□□□□ -1.39
HDAC2-208ENST00000520746 DNAJC14Q6Y2X3 702 aaPredicted RBP6.35□□□□□ -1.39
HDAC2-208ENST00000520746 RNF111Q6ZNA4 994 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 CXorf38Q8TB03 319 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 GATAD2BQ8WXI9 593 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 VWCEQ96DN2 955 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
HDAC2-208ENST00000520746 EPB41L4AQ9HCS5 686 aaPredicted RBP6.35□□□□□ -1.39
HDAC2-208ENST00000520746 OTOL1A6NHN0 477 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 F6X3S4 739 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 NRDCO43847 1150 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 ST13P50502 369 aaKnown RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 AFF3P51826 1226 aaKnown RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 LMNB2Q03252 620 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 NMIQ13287 307 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 SKOR2Q2VWA4 1001 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 DIEXFQ68CQ4 756 aaKnown RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 WAPLQ7Z5K2 1190 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 USHBP1Q8N6Y0 703 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 SYTL5Q8TDW5 730 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 MAP6Q96JE9 813 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 FOXP3Q9BZS1 431 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 CNTD2Q9H8S5 307 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 CRTAC1Q9NQ79 661 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 SIRT5Q9NXA8 310 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 ZMYM5Q9UJ78 669 aa6.34□□□□□ -1.39
HDAC2-208ENST00000520746 POLR3KQ9Y2Y1 108 aaPredicted RBP6.34□□□□□ -1.39
HDAC2-208ENST00000520746 TMEM82A0PJX8 343 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 GRIN3BO60391 1043 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 SASH1O94885 1247 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 HTR3BO95264 441 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 ERCC3P19447 782 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 VIPR1P32241 457 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 KIR2DL1P43626 348 aaPredicted RBP6.33□□□□□ -1.4
HDAC2-208ENST00000520746 KIR2DL2P43627 348 aaPredicted RBP6.33□□□□□ -1.4
HDAC2-208ENST00000520746 TAF1CQ15572 869 aaPredicted RBP6.33□□□□□ -1.4
HDAC2-208ENST00000520746 ENOX1Q8TC92 643 aaKnown RBP6.33□□□□□ -1.4
HDAC2-208ENST00000520746 KIF2CQ99661 725 aa6.33□□□□□ -1.4
HDAC2-208ENST00000520746 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
HDAC2-208ENST00000520746 N4BP3O15049 544 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 PF4P02776 101 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 SDHBP21912 280 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 SLC14A2Q15849 920 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 DBX2Q6ZNG2 339 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 CEP128Q6ZU80 1094 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 FEZF2Q8TBJ5 459 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 HHIPL1Q96JK4 782 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 RHOVQ96L33 236 aa6.32□□□□□ -1.4
HDAC2-208ENST00000520746 ASCC2Q9H1I8 757 aaPredicted RBP6.32□□□□□ -1.4
HDAC2-208ENST00000520746 CTSHP09668 335 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 PNLIPP16233 465 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 CDR1P51861 262 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
HDAC2-208ENST00000520746 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
HDAC2-208ENST00000520746 DAGLBQ8NCG7 672 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 TCTN2Q96GX1 697 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 PLCD4Q9BRC7 762 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 PARP2Q9UGN5 583 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
HDAC2-208ENST00000520746 RGS13O14921 159 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 GBP1P32455 592 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 NFKB2Q00653 900 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 VMACQ2NL98 169 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 BBS9Q3SYG4 887 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 EAPPQ56P03 285 aaPredicted RBP6.3□□□□□ -1.4
HDAC2-208ENST00000520746 ZPBP2Q6X784 338 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 TMC3Q7Z5M5 1100 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 TMEFF1Q8IYR6 380 aa6.3□□□□□ -1.4
HDAC2-208ENST00000520746 FKTNO75072 461 aa6.29□□□□□ -1.4
HDAC2-208ENST00000520746 UBOX5O94941 541 aa6.29□□□□□ -1.4
HDAC2-208ENST00000520746 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
HDAC2-208ENST00000520746 ERVFRD-1P60508 538 aa6.29□□□□□ -1.4
HDAC2-208ENST00000520746 DAB2P98082 770 aa6.29□□□□□ -1.4
HDAC2-208ENST00000520746 SNW1Q13573 536 aaKnown RBP6.29□□□□□ -1.4
HDAC2-208ENST00000520746 ZNF655Q8N720 491 aaPredicted RBP6.29□□□□□ -1.4
HDAC2-208ENST00000520746 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
HDAC2-208ENST00000520746 SYPP08247 313 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 CELA3BP08861 270 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 CHMP4BP1P59074 171 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 RNF4P78317 190 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 PSMD2Q13200 908 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 GGNQ86UU5 652 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 SP8Q8IXZ3 490 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 ZDHHC14Q8IZN3 488 aa6.28□□□□□ -1.4
HDAC2-208ENST00000520746 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms