RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 ARHGAP39Q9C0H5 1083 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 ARPP21Q9UBL0 812 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 MYH8P13535 1937 aa13.19□□□□□ -0.3
UBE2D3-232ENST00000514755 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 APPP05067 770 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 GNAT2P19087 354 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 CABP5Q9NP86 173 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
UBE2D3-232ENST00000514755 SDSP20132 328 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 TDO2P48775 406 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 SIAH1Q8IUQ4 282 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
UBE2D3-232ENST00000514755 PEX10O60683 326 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 PRDM1O75626 825 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 BCRP11274 1271 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 SLC45A1Q9Y2W3 748 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 ROBO3Q96MS0 1386 aa13.16□□□□□ -0.3
UBE2D3-232ENST00000514755 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 RASA1P20936 1047 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 FEZ1Q99689 392 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 NAPBQ9H115 298 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 ASCC2Q9H1I8 757 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 IL25Q9H293 177 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-232ENST00000514755 PPARAQ07869 468 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
UBE2D3-232ENST00000514755 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 VCAM1P19320 739 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 ICA1Q05084 483 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 FBXO46Q6PJ61 603 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
UBE2D3-232ENST00000514755 CCDC85CA6NKD9 419 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 FGAP02671 866 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 PSMC4P43686 418 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 TXNRD2Q9NNW7 524 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 MGAMO43451 1857 aa13.12□□□□□ -0.31
UBE2D3-232ENST00000514755 USP14P54578 494 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 HERVK_113P62684 666 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
UBE2D3-232ENST00000514755 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.314e-7■■■■□ 24.1
UBE2D3-232ENST00000514755 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms