RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 RAD51AP2Q09MP3 1159 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 TIGD5Q53EQ6 642 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 PRR23BQ6ZRT6 265 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 ABHD4Q8TB40 342 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 SYTL5Q8TDW5 730 aaPredicted RBP7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 MYLIPQ8WY64 445 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 TCTN2Q96GX1 697 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 FOXP3Q9BZS1 431 aa7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 MKRN2Q9H000 416 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-225ENST00000508476 C9IYK1 514 aa7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 RAC2P15153 192 aa7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 ZNF124Q15973 351 aa7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 TDRD10Q5VZ19 366 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 KCNK12Q9HB15 430 aa7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-225ENST00000508476 MEIS1O00470 390 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 MESP2Q0VG99 397 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 ZPBP2Q6X784 338 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 DAGLBQ8NCG7 672 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 G6PC3Q9BUM1 346 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 RNF32Q9H0A6 362 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 GFOD1Q9NXC2 390 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 EFR3BQ9Y2G0 817 aa7.88□□□□□ -1.15
UBE2D3-225ENST00000508476 SIGLEC6O43699 453 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 FKTNO75072 461 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 FARP2O94887 1054 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 IMPDH2P12268 514 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 INTS3Q68E01 1043 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 PPFIBP1Q86W92 1011 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 LSRQ86X29 649 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 PDZD8Q8NEN9 1154 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 FAM86C1Q9NVL1 165 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 TCFL5Q9UL49 500 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 ZNF281Q9Y2X9 895 aa7.87□□□□□ -1.15
UBE2D3-225ENST00000508476 TMEM82A0PJX8 343 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 SHOXO15266 292 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 EFEMP2O95967 443 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 SYPP08247 313 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 RPL10P27635 214 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 GALK1P51570 392 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 BBS9Q3SYG4 887 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 UNC5AQ6ZN44 842 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 GPRASP2Q96D09 838 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 TM9SF2Q99805 663 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 CHST7Q9NS84 486 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 FBXL21Q9UKT6 434 aa7.86□□□□□ -1.15
UBE2D3-225ENST00000508476 YBX3P16989 372 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 CTSKP43235 329 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 WAPLQ7Z5K2 1190 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 CCDC144CPQ8IYA2 1237 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 TAB3Q8N5C8 712 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 DHX38Q92620 1227 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 ACBD3Q9H3P7 528 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 PCDHB12Q9Y5F1 795 aa7.85□□□□□ -1.15
UBE2D3-225ENST00000508476 NOTOA8MTQ0 251 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 GUCY2CP25092 1073 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 SOX9P48436 509 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 PMS1P54277 932 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 PCBP3P57721 371 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 LINC00116Q8NCU8 138 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 RASGRP4Q8TDF6 673 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 DHRS1Q96LJ7 313 aa7.84□□□□□ -1.15
UBE2D3-225ENST00000508476 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 FITM1A5D6W6 292 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 PSPNO60542 156 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 TP53P04637 393 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 GJA8P48165 433 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 CRTC3Q6UUV7 619 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 OXR1Q8N573 874 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
UBE2D3-225ENST00000508476 SSU72P8A0A1W2PR75 194 aa7.82□□□□□ -1.16
UBE2D3-225ENST00000508476 DUSP4Q13115 394 aa7.82□□□□□ -1.16
UBE2D3-225ENST00000508476 FAM84AQ96KN4 292 aa7.82□□□□□ -1.16
UBE2D3-225ENST00000508476 GPR160Q9UJ42 338 aa7.82□□□□□ -1.16
UBE2D3-225ENST00000508476 NASPP49321 788 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 COL9A2Q14055 689 aaPredicted RBP7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 NR0B2Q15466 257 aa7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 ANKS4BQ8N8V4 417 aa7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 SHISA4Q96DD7 197 aa7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 MAP6Q96JE9 813 aa7.81□□□□□ -1.16
UBE2D3-225ENST00000508476 HHIPL1Q96JK4 782 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms