RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CYTH3O43739 400 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 KIF5BP33176 963 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CLCN2P51788 898 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 GNGT1P63211 74 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 SEPT2Q15019 361 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CCDC153Q494R4 210 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 TBC1D9BQ66K14 1250 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 C3orf62Q6ZUJ4 267 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 TTC30BQ8N4P2 665 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 GABPB2Q8TAK5 448 aaPredicted RBP12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 DEPTORQ8TB45 409 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 STAMBPL1Q96FJ0 436 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CCDC28BQ9BUN5 200 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 OSBPL1AQ9BXW6 950 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 EPN3Q9H201 632 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CLSTN2Q9H4D0 955 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 COMMD8Q9NX08 183 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 CNPY2Q9Y2B0 182 aa12.02□□□□□ -0.48
PDLIM5-210ENST00000508216 BAG3O95817 575 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 GSTA1P08263 222 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 MLH1P40692 756 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 BPIFB4P59827 614 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 TUBA1BP68363 451 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 MXRA7P84157 204 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 KCNA1Q09470 495 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 TRIM71Q2Q1W2 868 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 NAA35Q5VZE5 725 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF554Q86TJ5 538 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 BPHLQ86WA6 291 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 C1orf131Q8NDD1 294 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 SLC7A5P2Q9GIP4 190 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 TBCCD1Q9NVR7 557 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 KIAA1522Q9P206 1035 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
PDLIM5-210ENST00000508216 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 DPPA5A6NC42 116 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 RAPGEF3O95398 923 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 PMS2P54278 862 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 PPP4CP60510 307 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 ELF3P78545 371 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 MECOMQ03112 1051 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 TMEM53Q6P2H8 277 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 ARHGEF25Q86VW2 580 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 NR1H4Q96RI1 486 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 TIMM22Q9Y584 194 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
PDLIM5-210ENST00000508216 CFAP73A6NFT4 308 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 BOLA2-SMG1P6H3BVE0 249 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 N4BP3O15049 544 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 PRPF3O43395 683 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 USO1O60763 962 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 F13A1P00488 732 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 S100A1P23297 94 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 CCND1P24385 295 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ACADVLP49748 655 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 TUBA4AP68366 448 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 GPSM2P81274 684 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 CDK17Q00537 523 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 TSR1Q2NL82 804 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 CCDC14Q49A88 953 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 IQCEQ6IPM2 695 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 CFAP61Q8NHU2 1237 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 IFT81Q8WYA0 676 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 RUBCNQ92622 972 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 KIFAP3Q92845 792 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 CLIP3Q96DZ5 547 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ABHD8Q96I13 439 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 PNKPQ96T60 521 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 PRELID1Q9Y255 219 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 SKIP12755 728 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ATICP31939 592 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 MRPS25P82663 173 aaKnown RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 PLOD1Q02809 727 aaPredicted RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 SPIDRQ14159 915 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
PDLIM5-210ENST00000508216 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ZNF804AQ7Z570 1209 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 STKLD1Q8NE28 680 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 GDAP1Q8TB36 358 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 DYDC1Q8WWB3 177 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 MPP4Q96JB8 637 aa12□□□□□ -0.49
PDLIM5-210ENST00000508216 GSDMAQ96QA5 445 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms